Detailed information NTG0341087

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: F4V40_RS22435
• Genome accession: NZ_CP044145
• Coordinates: 4251772..4252755 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli O157 strain AR-0428
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4246772..4257755

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F4V40_RS22405	bcsF	4246933..4247124 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
F4V40_RS22410	bcsG	4247121..4248800 (+)	1680	WP_000191596.1	cellulose biosynthesis protein BcsG	-
F4V40_RS22415	ldrD	4248887..4248994 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
F4V40_RS22425	yhjV	4249470..4250741 (+)	1272	WP_001301684.1	aromatic amino acid transport family protein	-
F4V40_RS22430	dppF	4250771..4251775 (-)	1005	WP_000107027.1	dipeptide ABC transporter ATP-binding subunit DppF	-
F4V40_RS22435	amiE	4251772..4252755 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
F4V40_RS22440	dppC	4252766..4253668 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
F4V40_RS22445	dppB	4253678..4254697 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
F4V40_RS22455	dppA	4254848..4256455 (-)	1608	WP_001222888.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=341087 F4V40_RS22435 WP_001196486.1 4251772..4252755(-) (amiE) [Escherichia coli O157 strain AR-0428]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=341087 F4V40_RS22435 WP_001196486.1 4251772..4252755(-) (amiE) [Escherichia coli O157 strain AR-0428]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATTAG
CTACAGCGTAAAACAGGGCGAAGTAGTCGGGATTGTGGGTGAGTCTGGCTCCGGTAAGTCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTGATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCGGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGTCGTCAGCGGGCGATTGACT
TGTTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATTGCGATGGCCATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATTGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCCGGTCAGGTGGTGGAAACGGGCGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCATCGTTGCCTGGCGTTGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCTTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404