Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   ETT71_RS09245 Genome accession   NZ_CP035428
Coordinates   54174..54272 (+) Length   32 a.a.
NCBI ID   WP_020833188.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emmSTG866.1     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 49174..59272
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT71_RS00320 (ETT71_00320) - 50034..51731 (+) 1698 WP_020904816.1 AIPR family protein -
  ETT71_RS00325 (ETT71_00325) purB 51749..53041 (+) 1293 WP_020904817.1 adenylosuccinate lyase -
  ETT71_RS00330 (ETT71_00330) comR 53172..54083 (+) 912 WP_020904818.1 XRE family transcriptional regulator Regulator
  ETT71_RS09245 comS 54174..54272 (+) 99 WP_020833188.1 quorum-sensing system DWW-type pheromone Regulator
  ETT71_RS00335 (ETT71_00335) ruvB 54303..55301 (+) 999 WP_136093679.1 Holliday junction branch migration DNA helicase RuvB -
  ETT71_RS00340 (ETT71_00340) - 55439..55876 (+) 438 WP_020904819.1 low molecular weight protein-tyrosine-phosphatase -
  ETT71_RS00345 (ETT71_00345) - 55900..56301 (+) 402 WP_002986671.1 MORN repeat-containing protein -
  ETT71_RS00350 (ETT71_00350) - 56298..58073 (+) 1776 WP_014407199.1 acyltransferase family protein -

Sequence

Protein


Download         Length: 32 a.a.        Molecular weight: 3758.63 Da        Isoelectric Point: 10.7919

>NTDB_id=341084 ETT71_RS09245 WP_020833188.1 54174..54272(+) (comS) [Streptococcus pyogenes strain emmSTG866.1]
MLKKVKPFLLLAAVVAFKVARVMHEFDWWNLG

Nucleotide


Download         Length: 99 bp        

>NTDB_id=341084 ETT71_RS09245 WP_020833188.1 54174..54272(+) (comS) [Streptococcus pyogenes strain emmSTG866.1]
ATGTTAAAAAAAGTTAAGCCATTTTTACTATTAGCCGCAGTAGTTGCATTTAAAGTTGCTCGTGTAATGCATGAATTTGA
TTGGTGGAATCTTGGTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS315

100

100

1
  comS Streptococcus pyogenes MGAS8232

45.161

96.875

0.437

Multiple sequence alignment