Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ETT71_RS08755 Genome accession   NZ_CP035428
Coordinates   1737296..1738009 (+) Length   237 a.a.
NCBI ID   WP_002992823.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emmSTG866.1     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1732296..1743009
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT71_RS08745 (ETT71_08740) treC 1733366..1734994 (-) 1629 WP_136093528.1 alpha,alpha-phosphotrehalase -
  ETT71_RS08750 (ETT71_08745) treP 1735061..1737085 (-) 2025 WP_109828657.1 PTS system trehalose-specific EIIBC component -
  ETT71_RS08755 (ETT71_08750) treR 1737296..1738009 (+) 714 WP_002992823.1 trehalose operon repressor Regulator
  ETT71_RS08765 (ETT71_08760) - 1738288..1738626 (-) 339 Protein_1624 winged helix-turn-helix transcriptional regulator -
  ETT71_RS08770 (ETT71_08765) - 1738813..1739670 (+) 858 WP_009881025.1 VOC family protein -
  ETT71_RS08775 (ETT71_08770) yaaA 1739712..1740443 (+) 732 WP_012561068.1 peroxide stress protein YaaA -
  ETT71_RS08780 (ETT71_08775) nrdG 1740616..1741230 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  ETT71_RS08785 (ETT71_08780) - 1741230..1741739 (-) 510 WP_011018311.1 GNAT family N-acetyltransferase -
  ETT71_RS08790 (ETT71_08785) - 1741748..1742683 (-) 936 WP_136093526.1 Gfo/Idh/MocA family protein -
  ETT71_RS09235 - 1742712..1742858 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27620.79 Da        Isoelectric Point: 9.6307

>NTDB_id=341079 ETT71_RS08755 WP_002992823.1 1737296..1738009(+) (treR) [Streptococcus pyogenes strain emmSTG866.1]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=341079 ETT71_RS08755 WP_002992823.1 1737296..1738009(+) (treR) [Streptococcus pyogenes strain emmSTG866.1]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTCGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.376

98.734

0.675

Multiple sequence alignment