Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   ETT73_RS08475 Genome accession   NZ_CP035426
Coordinates   1673222..1673935 (+) Length   237 a.a.
NCBI ID   WP_136276708.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm57     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1668222..1678935
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT73_RS08465 (ETT73_08460) treC 1669292..1670920 (-) 1629 WP_136276709.1 alpha,alpha-phosphotrehalase -
  ETT73_RS08470 (ETT73_08465) treP 1670987..1673011 (-) 2025 WP_136099147.1 PTS system trehalose-specific EIIBC component -
  ETT73_RS08475 (ETT73_08470) treR 1673222..1673935 (+) 714 WP_136276708.1 trehalose operon repressor Regulator
  ETT73_RS08485 (ETT73_08480) - 1674213..1674544 (-) 332 Protein_1551 winged helix-turn-helix transcriptional regulator -
  ETT73_RS08490 (ETT73_08485) - 1674731..1675587 (+) 857 Protein_1552 VOC family protein -
  ETT73_RS08495 (ETT73_08490) yaaA 1675629..1676360 (+) 732 WP_063631416.1 peroxide stress protein YaaA -
  ETT73_RS08500 (ETT73_08495) nrdG 1676534..1677148 (-) 615 WP_136276707.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  ETT73_RS08505 (ETT73_08500) - 1677163..1677657 (-) 495 WP_136114421.1 GNAT family N-acetyltransferase -
  ETT73_RS08510 (ETT73_08505) - 1677666..1678601 (-) 936 WP_136106359.1 Gfo/Idh/MocA family protein -
  ETT73_RS08945 - 1678630..1678776 (-) 147 WP_011106921.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27668.88 Da        Isoelectric Point: 9.7182

>NTDB_id=340969 ETT73_RS08475 WP_136276708.1 1673222..1673935(+) (treR) [Streptococcus pyogenes strain emm57]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVYETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=340969 ETT73_RS08475 WP_136276708.1 1673222..1673935(+) (treR) [Streptococcus pyogenes strain emm57]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGTATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACACGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

67.949

98.734

0.671

Multiple sequence alignment