Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ETT73_RS06155 Genome accession   NZ_CP035426
Coordinates   1193650..1194687 (-) Length   345 a.a.
NCBI ID   WP_111693301.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm57     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1188650..1199687
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT73_RS06130 (ETT73_06125) - 1188654..1189181 (-) 528 WP_014635585.1 Dps family protein -
  ETT73_RS06135 (ETT73_06130) - 1189409..1190035 (+) 627 WP_002989076.1 A24 family peptidase -
  ETT73_RS06140 (ETT73_06135) rlmN 1190117..1191196 (-) 1080 WP_136112628.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  ETT73_RS06145 (ETT73_06140) - 1191200..1191820 (-) 621 WP_002992791.1 YutD family protein -
  ETT73_RS06150 (ETT73_06145) - 1192268..1193245 (-) 978 WP_002994809.1 LacI family DNA-binding transcriptional regulator -
  ETT73_RS06155 (ETT73_06150) sepM 1193650..1194687 (-) 1038 WP_111693301.1 SepM family pheromone-processing serine protease Regulator
  ETT73_RS06160 (ETT73_06155) coaD 1194674..1195165 (-) 492 WP_002983821.1 pantetheine-phosphate adenylyltransferase -
  ETT73_RS06165 (ETT73_06160) rsmD 1195155..1195694 (-) 540 WP_002983819.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ETT73_RS06170 (ETT73_06165) asnA 1195817..1196809 (-) 993 WP_023611792.1 aspartate--ammonia ligase -
  ETT73_RS06175 (ETT73_06170) arcC 1197123..1198073 (-) 951 WP_009880962.1 carbamate kinase -
  ETT73_RS06180 (ETT73_06175) - 1198093..1199424 (-) 1332 WP_136276610.1 dipeptidase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37527.22 Da        Isoelectric Point: 9.6692

>NTDB_id=340958 ETT73_RS06155 WP_111693301.1 1193650..1194687(-) (sepM) [Streptococcus pyogenes strain emm57]
MKRLKKIKWWLVGLLALISLLLALFFPLPYYIEMPGGAYDIRSVLQVNGKEDKRKGAYQFVAVGISRASLAQLLYAWLTP
FTEISTAEDTTGGYSDADFLRINQFYMETSQNAAIYQALSLAGKPVTLDYKGVYVLDVNNESTFKGTLHLADTVTGVNGK
QFTSSAELIDYVSHLKLGDEVTVQFTSDNKPKKGVGRIIKLKNGKNGIGIALTDHTSVNSEDTVIFSTKGVGGPSAGLMF
TLDIYDQITKEDLRKGRTIAGTGTIGKDGEVGDIGGAGLKVVAAAEAGADIFFVPNNPVDKEIKKVNPNAISNYEEAKRA
AKRLKTKMKIVPVTTVQEALVYLRK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=340958 ETT73_RS06155 WP_111693301.1 1193650..1194687(-) (sepM) [Streptococcus pyogenes strain emm57]
ATGAAAAGACTTAAAAAAATCAAATGGTGGTTAGTGGGTCTGCTAGCTTTAATCTCTTTGTTGCTAGCGTTATTTTTTCC
GCTACCTTATTATATTGAAATGCCTGGAGGCGCTTACGATATTCGGTCTGTCTTACAAGTCAATGGCAAAGAAGACAAAC
GAAAAGGAGCTTACCAGTTTGTTGCAGTGGGCATTAGTCGTGCCAGCCTCGCTCAGCTATTATATGCTTGGCTGACACCG
TTTACTGAAATTAGTACAGCAGAAGATACAACAGGCGGATACAGCGATGCTGATTTCCTTCGAATTAATCAATTTTACAT
GGAAACATCACAAAATGCAGCTATTTATCAAGCTTTATCCTTAGCTGGAAAACCAGTTACATTAGATTATAAAGGCGTAT
ATGTTTTAGACGTAAACAACGAATCTACTTTTAAAGGAACGTTACACTTAGCAGATACTGTAACAGGTGTAAATGGTAAA
CAGTTTACTAGTTCAGCAGAACTTATTGACTATGTTTCTCACCTAAAACTAGGAGATGAAGTTACGGTTCAGTTTACGAG
TGATAATAAGCCTAAAAAAGGAGTTGGCCGTATTATCAAACTGAAAAATGGGAAAAATGGGATTGGCATTGCCTTGACTG
ATCATACAAGTGTCAATTCAGAAGACACAGTGATCTTTAGTACTAAAGGAGTAGGAGGACCTAGTGCTGGTCTAATGTTT
ACTCTTGATATATATGATCAAATAACTAAAGAAGATTTACGCAAGGGCCGTACAATTGCAGGTACAGGAACTATTGGCAA
GGATGGCGAAGTAGGAGATATTGGTGGTGCAGGTCTTAAAGTAGTTGCAGCAGCTGAAGCTGGTGCAGATATATTTTTTG
TTCCGAATAATCCTGTTGATAAGGAAATTAAAAAAGTTAATCCAAATGCTATAAGTAATTACGAAGAAGCCAAACGGGCA
GCCAAACGACTAAAGACCAAAATGAAGATTGTTCCTGTTACGACTGTTCAAGAGGCACTGGTTTATCTTCGCAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

69.565

100

0.696


Multiple sequence alignment