Detailed information NTG0340910

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ETL60_RS19610
• Genome accession: NZ_CP035414
• Coordinates: 3660924..3662069 (+)
• Length: 381 a.a.
• NCBI ID: WP_021480843.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103637
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3655924..3667069

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ETL60_RS19585 (ETL60_19585)	albF	3655940..3657220 (+)	1281	WP_069964371.1	pitrilysin family protein	-
ETL60_RS19590 (ETL60_19590)	albG	3657217..3657918 (+)	702	WP_014481222.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
ETL60_RS19595 (ETL60_19595)	ywhL	3657924..3659300 (-)	1377	WP_014481223.1	YncE family protein	-
ETL60_RS19600 (ETL60_19600)	ywhK	3659339..3660694 (-)	1356	WP_049140945.1	YncE family protein	-
ETL60_RS22205 (ETL60_19605)	-	3660691..3660921 (-)	231	Protein_3807	hypothetical protein	-
ETL60_RS19610 (ETL60_19610)	rapF	3660924..3662069 (+)	1146	WP_021480843.1	response regulator aspartate phosphatase RapF	Regulator
ETL60_RS19615 (ETL60_19615)	phrF	3662053..3662172 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
ETL60_RS22065	-	3662286..3662734 (+)	449	Protein_3810	YbaK/EbsC family protein	-
ETL60_RS19630 (ETL60_19630)	speB	3662766..3663638 (-)	873	WP_003227545.1	agmatinase	-
ETL60_RS19635 (ETL60_19635)	speE	3663699..3664529 (-)	831	WP_003227543.1	spermidine synthase	-
ETL60_RS19640 (ETL60_19640)	pbpG	3664732..3666807 (+)	2076	WP_015384942.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45603.10 Da
• Isoelectric Point: 5.1493

>NTDB_id=340910 ETL60_RS19610 WP_021480843.1 3660924..3662069(+) (rapF) [Bacillus subtilis strain SRCM103637]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFNFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=340910 ETL60_RS19610 WP_021480843.1 3660924..3662069(+) (rapF) [Bacillus subtilis strain SRCM103637]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTAATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.213	100	0.992
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572