Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ETL60_RS07900 Genome accession   NZ_CP035414
Coordinates   1488922..1489386 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain SRCM103637     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1483922..1494386
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETL60_RS07880 (ETL60_07880) kinA 1484390..1486222 (+) 1833 WP_069964148.1 sporulation histidine kinase KinA -
  ETL60_RS07885 (ETL60_07885) dapX 1486219..1487400 (-) 1182 WP_014479654.1 aminotransferase A -
  ETL60_RS07890 (ETL60_07890) - 1487602..1487763 (-) 162 WP_003245246.1 hypothetical protein -
  ETL60_RS07895 (ETL60_07895) cheV 1487967..1488878 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  ETL60_RS07900 (ETL60_07900) kre 1488922..1489386 (-) 465 WP_003232406.1 YkyB family protein Regulator
  ETL60_RS07905 (ETL60_07905) ykuC 1489512..1490804 (-) 1293 WP_015252195.1 MFS transporter -
  ETL60_RS07910 (ETL60_07910) ltdD 1490880..1491374 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  ETL60_RS07915 (ETL60_07915) ppeE 1491431..1492291 (-) 861 WP_003232400.1 metallophosphoesterase -
  ETL60_RS07920 (ETL60_07920) fadH 1492434..1493198 (+) 765 WP_015383534.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=340865 ETL60_RS07900 WP_003232406.1 1488922..1489386(-) (kre) [Bacillus subtilis strain SRCM103637]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=340865 ETL60_RS07900 WP_003232406.1 1488922..1489386(-) (kre) [Bacillus subtilis strain SRCM103637]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment