Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ETL60_RS04610 Genome accession   NZ_CP035414
Coordinates   895054..895848 (+) Length   264 a.a.
NCBI ID   WP_021481166.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103637     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 890054..900848
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETL60_RS04580 (ETL60_04580) sxzA 890894..891925 (+) 1032 WP_087614454.1 iron ABC transporter permease -
  ETL60_RS04585 (ETL60_04585) yfhB 892039..892920 (+) 882 WP_014479213.1 PhzF family phenazine biosynthesis isomerase -
  ETL60_RS04590 (ETL60_04590) yfhC 893008..893592 (+) 585 WP_032723010.1 nitroreductase -
  ETL60_RS04595 (ETL60_04595) yfhD 893631..893822 (-) 192 WP_003233561.1 YfhD family protein -
  ETL60_RS04600 (ETL60_04600) yfhE 893889..893999 (-) 111 WP_003223230.1 YfhE family protein -
  ETL60_RS04605 (ETL60_04605) yfhF 894054..894965 (-) 912 WP_087614455.1 TIGR01777 family oxidoreductase -
  ETL60_RS04610 (ETL60_04610) recX 895054..895848 (+) 795 WP_021481166.1 recombination regulator RecX Regulator
  ETL60_RS04615 (ETL60_04615) yfhH 895850..896164 (+) 315 WP_049140592.1 YfhH family protein -
  ETL60_RS04620 (ETL60_04620) yfhI 896307..897500 (+) 1194 WP_003243500.1 MFS transporter -
  ETL60_RS04625 (ETL60_04625) sspK 897532..897684 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  ETL60_RS04630 (ETL60_04630) yfhJ 897809..898078 (+) 270 WP_003243789.1 YfhJ family protein -
  ETL60_RS04635 (ETL60_04635) yfhK 898223..898741 (+) 519 WP_015252515.1 SH3 domain-containing protein -
  ETL60_RS04640 (ETL60_04640) spdL 898826..899158 (+) 333 WP_049140590.1 SdpC immunity protein SpdL -
  ETL60_RS04645 (ETL60_04645) ephM 899145..900005 (+) 861 WP_087614456.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31025.29 Da        Isoelectric Point: 6.6686

>NTDB_id=340848 ETL60_RS04610 WP_021481166.1 895054..895848(+) (recX) [Bacillus subtilis strain SRCM103637]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQIRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=340848 ETL60_RS04610 WP_021481166.1 895054..895848(+) (recX) [Bacillus subtilis strain SRCM103637]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGATAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment