Detailed information NTG0340830

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ETL58_RS19565
• Genome accession: NZ_CP035413
• Coordinates: 3741986..3743131 (+)
• Length: 381 a.a.
• NCBI ID: WP_029318693.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103629
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3736986..3748131

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ETL58_RS19540 (ETL58_19540)	albF	3737002..3738282 (+)	1281	WP_029318696.1	pitrilysin family protein	-
ETL58_RS19545 (ETL58_19545)	albG	3738279..3738980 (+)	702	WP_029318695.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
ETL58_RS19550 (ETL58_19550)	ywhL	3738986..3740362 (-)	1377	WP_101172255.1	YncE family protein	-
ETL58_RS19555 (ETL58_19555)	ywhK	3740401..3741756 (-)	1356	WP_015250986.1	YncE family protein	-
ETL58_RS19565 (ETL58_19565)	rapF	3741986..3743131 (+)	1146	WP_029318693.1	response regulator aspartate phosphatase RapF	Regulator
ETL58_RS19570 (ETL58_19570)	phrF	3743115..3743234 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
ETL58_RS19575 (ETL58_19575)	-	3743461..3743937 (+)	477	WP_015384936.1	hypothetical protein	-
ETL58_RS19580 (ETL58_19580)	-	3744197..3744883 (+)	687	WP_241495663.1	hypothetical protein	-
ETL58_RS19595 (ETL58_19595)	-	3746359..3747006 (+)	648	WP_029318689.1	ABC transporter ATP-binding protein	-
ETL58_RS19600 (ETL58_19600)	-	3746999..3747562 (+)	564	WP_015483840.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45594.05 Da
• Isoelectric Point: 5.0624

>NTDB_id=340830 ETL58_RS19565 WP_029318693.1 3741986..3743131(+) (rapF) [Bacillus subtilis strain SRCM103629]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=340830 ETL58_RS19565 WP_029318693.1 3741986..3743131(+) (rapF) [Bacillus subtilis strain SRCM103629]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACATATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.95	100	0.99
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572