Detailed information NTG0340791

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: F5K02_RS08515
• Genome accession: NZ_CP044132
• Coordinates: 1694652..1695641 (+)
• Length: 329 a.a.
• NCBI ID: WP_003154301.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain ZKY01
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1689652..1700641

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F5K02_RS08500 (F5K02_08570)	acpP	1689849..1690082 (+)	234	WP_003154310.1	acyl carrier protein	-
F5K02_RS08505 (F5K02_08575)	rncS	1690221..1690970 (+)	750	WP_014417754.1	ribonuclease III	-
F5K02_RS08510 (F5K02_08580)	smc	1691072..1694632 (+)	3561	WP_241458198.1	chromosome segregation protein SMC	-
F5K02_RS08515 (F5K02_08585)	pilA	1694652..1695641 (+)	990	WP_003154301.1	signal recognition particle-docking protein FtsY	Machinery gene
F5K02_RS08520 (F5K02_08590)	-	1695725..1696495 (+)	771	WP_043021077.1	aminoglycoside phosphotransferase family protein	-
F5K02_RS08525 (F5K02_08595)	-	1696617..1696949 (+)	333	WP_003154299.1	putative DNA-binding protein	-
F5K02_RS08530 (F5K02_08600)	ffh	1696963..1698303 (+)	1341	WP_007409763.1	signal recognition particle protein	-
F5K02_RS08535 (F5K02_08605)	rpsP	1698409..1698681 (+)	273	WP_003154296.1	30S ribosomal protein S16	-
F5K02_RS08540 (F5K02_08610)	-	1698681..1698926 (+)	246	WP_007611392.1	KH domain-containing protein	-
F5K02_RS08545 (F5K02_08615)	-	1699017..1699403 (+)	387	WP_003154291.1	YlqD family protein	-
F5K02_RS08550 (F5K02_08620)	rimM	1699408..1699932 (+)	525	WP_003154290.1	ribosome maturation factor RimM	-

Sequence

Protein

• Length: 329 a.a.
• Molecular weight: 36096.28 Da
• Isoelectric Point: 5.0098

>NTDB_id=340791 F5K02_RS08515 WP_003154301.1 1694652..1695641(+) (pilA) [Bacillus amyloliquefaciens strain ZKY01]
MSFFKKLKEKITKQTDSVSEKFKDGLEKTRNSFSNKVNELVSRYRKVDEDFFEELEEVLIGADVGFTTVMELIDELKKEV
KLKNIQDPQEVQSVISEKLVDIYNSGDEQISELNIQDGRLNVILLVGVNGVGKTTTIGKLAHKLKNEGKSVVLAAGDTFR
AGAIEQLEVWGERTGVPVIKQAAGSDPAAVIYDAVHAAKARGADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPH
EVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVGLGEKVDDLQRFDAESYVYGLF
SDLVEKAED

Nucleotide

• Length: 990 bp

>NTDB_id=340791 F5K02_RS08515 WP_003154301.1 1694652..1695641(+) (pilA) [Bacillus amyloliquefaciens strain ZKY01]
ATGAGCTTTTTTAAAAAATTAAAAGAGAAAATCACGAAACAGACAGACTCCGTCTCTGAAAAATTTAAAGATGGTCTTGA
AAAAACAAGAAATTCCTTCTCAAATAAAGTGAACGAACTCGTCTCCCGCTACCGGAAAGTCGACGAGGATTTCTTCGAAG
AGCTTGAGGAAGTGCTGATTGGCGCTGACGTAGGTTTTACAACCGTCATGGAGCTGATTGATGAGCTCAAAAAAGAAGTG
AAGCTGAAAAACATCCAGGATCCTCAGGAAGTGCAGTCCGTCATTTCTGAAAAGCTTGTCGACATTTATAACAGCGGCGA
CGAACAGATTTCTGAATTAAATATTCAGGACGGGCGCCTGAACGTTATTCTGCTTGTCGGGGTAAACGGCGTCGGAAAAA
CGACAACGATCGGAAAACTTGCCCATAAGCTGAAGAATGAAGGCAAATCCGTTGTGCTCGCTGCCGGAGACACCTTCAGA
GCCGGGGCGATTGAACAGCTTGAAGTGTGGGGGGAGCGTACAGGCGTGCCTGTCATTAAACAGGCTGCCGGAAGCGACCC
TGCTGCGGTTATTTATGATGCCGTACACGCGGCTAAAGCAAGAGGAGCGGATGTGCTGATTTGTGATACGGCCGGCCGCC
TTCAGAATAAAGTAAACTTAATGAAAGAGCTTGAAAAAGTCAAACGCGTCATCGAACGCGAAGTGCCTGAGGCTCCGCAT
GAGGTTCTCCTTGCGCTGGACGCGACGACAGGCCAAAATGCGATGGCGCAGGCGAAAGAATTCTCCAAAGCGACGAATGT
GACGGGTATCGCGTTAACGAAGCTTGACGGCACCGCAAAAGGCGGTATCGTCTTGGCGATCCGCAATGAGCTTCACATCC
CCGTGAAACTGGTCGGCCTCGGAGAAAAGGTTGACGATCTCCAGCGGTTTGATGCAGAATCTTACGTATACGGTCTCTTT
TCTGATTTAGTTGAAAAAGCCGAGGATTAA

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (121-320)

• SRP54-type protein, helical bundle domain (SRP54_N) (33-99)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	45.333	91.185	0.413