Detailed information    

insolico Bioinformatically predicted

Overview


Name   med   Type   Regulator
Locus tag   ETL58_RS06470 Genome accession   NZ_CP035413
Coordinates   1222880..1223833 (+) Length   317 a.a.
NCBI ID   WP_014476425.1    Uniprot ID   A0A0K6M9I2
Organism   Bacillus subtilis strain SRCM103629     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 1217880..1228833
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETL58_RS06445 (ETL58_06445) argF 1219712..1220671 (+) 960 WP_014476421.1 ornithine carbamoyltransferase -
  ETL58_RS06450 (ETL58_06450) yjzC 1220757..1220936 (+) 180 WP_003245356.1 YjzC family protein -
  ETL58_RS06455 (ETL58_06455) yjzD 1220983..1221168 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  ETL58_RS06460 (ETL58_06460) - 1221417..1222151 (+) 735 WP_032721340.1 hypothetical protein -
  ETL58_RS06465 (ETL58_06465) - 1222233..1222790 (+) 558 WP_101172488.1 hypothetical protein -
  ETL58_RS06470 (ETL58_06470) med 1222880..1223833 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  ETL58_RS06475 (ETL58_06475) comZ 1223848..1224039 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  ETL58_RS06480 (ETL58_06480) yjzB 1224069..1224299 (-) 231 WP_080265337.1 spore coat protein YjzB -
  ETL58_RS06485 (ETL58_06485) fabH 1224464..1225402 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  ETL58_RS06490 (ETL58_06490) fabF 1225425..1226666 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  ETL58_RS06495 (ETL58_06495) yjaZ 1226742..1227527 (+) 786 WP_069322523.1 DUF2268 domain-containing protein -
  ETL58_RS06500 (ETL58_06500) appD 1227719..1228705 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence


Protein


Download         Length: 317 a.a.        Molecular weight: 35310.84 Da        Isoelectric Point: 4.6031

>NTDB_id=340777 ETL58_RS06470 WP_014476425.1 1222880..1223833(+) (med) [Bacillus subtilis strain SRCM103629]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=340777 ETL58_RS06470 WP_014476425.1 1222880..1223833(+) (med) [Bacillus subtilis strain SRCM103629]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGTACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0K6M9I2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

99.685

100

0.997


Multiple sequence alignment