Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ETL58_RS04950 Genome accession   NZ_CP035413
Coordinates   941895..942689 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain SRCM103629     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 936895..947689
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETL58_RS04920 (ETL58_04920) sxzA 937734..938765 (+) 1032 WP_029317459.1 iron ABC transporter permease -
  ETL58_RS04925 (ETL58_04925) yfhB 938880..939761 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  ETL58_RS04930 (ETL58_04930) yfhC 939849..940433 (+) 585 WP_003243940.1 nitroreductase -
  ETL58_RS04935 (ETL58_04935) yfhD 940472..940663 (-) 192 WP_003233561.1 YfhD family protein -
  ETL58_RS04940 (ETL58_04940) yfhE 940730..940840 (-) 111 WP_003223230.1 YfhE family protein -
  ETL58_RS04945 (ETL58_04945) yfhF 940895..941806 (-) 912 WP_029317458.1 TIGR01777 family oxidoreductase -
  ETL58_RS04950 (ETL58_04950) recX 941895..942689 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  ETL58_RS04955 (ETL58_04955) yfhH 942691..943005 (+) 315 WP_003244592.1 YfhH family protein -
  ETL58_RS04960 (ETL58_04960) yfhI 943148..944341 (+) 1194 WP_029317457.1 MFS transporter -
  ETL58_RS04965 (ETL58_04965) sspK 944373..944525 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  ETL58_RS04970 (ETL58_04970) yfhJ 944650..944919 (+) 270 WP_003243789.1 YfhJ family protein -
  ETL58_RS04975 (ETL58_04975) yfhK 945064..945582 (+) 519 WP_029317456.1 SH3 domain-containing protein -
  ETL58_RS04980 (ETL58_04980) spdL 945667..945984 (+) 318 WP_021481164.1 SdpC immunity protein SpdL -
  ETL58_RS04985 (ETL58_04985) ephM 945986..946846 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=340769 ETL58_RS04950 WP_003243354.1 941895..942689(+) (recX) [Bacillus subtilis strain SRCM103629]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=340769 ETL58_RS04950 WP_003243354.1 941895..942689(+) (recX) [Bacillus subtilis strain SRCM103629]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTTATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGGGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment