Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   ETK71_RS01935 Genome accession   NZ_CP035411
Coordinates   358037..358435 (-) Length   132 a.a.
NCBI ID   WP_003246342.1    Uniprot ID   A0AAE2SGH7
Organism   Bacillus subtilis strain SRCM103622     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 353037..363435
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETK71_RS01905 (ETK71_01905) yckA 353735..354415 (-) 681 WP_003234624.1 amino acid ABC transporter permease -
  ETK71_RS01910 (ETK71_01910) yckB 354425..355288 (-) 864 WP_129138117.1 transporter substrate-binding domain-containing protein -
  ETK71_RS01915 (ETK71_01915) - 355450..355645 (+) 196 Protein_333 hypothetical protein -
  ETK71_RS01920 (ETK71_01920) - 355685..355999 (+) 315 Protein_334 RDD family protein -
  ETK71_RS01925 (ETK71_01925) yckD 356081..356413 (+) 333 WP_015252849.1 YckD family protein -
  ETK71_RS01930 (ETK71_01930) bglC 356567..358000 (+) 1434 WP_129138118.1 6-phospho-beta-glucosidase -
  ETK71_RS01935 (ETK71_01935) nin/comJ 358037..358435 (-) 399 WP_003246342.1 DNA-entry nuclease inhibitor Regulator
  ETK71_RS01940 (ETK71_01940) nucA/comI 358462..358911 (-) 450 WP_003246436.1 DNA-entry nuclease Machinery gene
  ETK71_RS01945 (ETK71_01945) tlpC 359079..360800 (-) 1722 WP_003246498.1 methyl-accepting chemotaxis protein TlpC -
  ETK71_RS01950 (ETK71_01950) hxlB 360911..361468 (-) 558 WP_003246343.1 6-phospho-3-hexuloisomerase -
  ETK71_RS01955 (ETK71_01955) hxlA 361474..362106 (-) 633 WP_003246452.1 3-hexulose-6-phosphate synthase -
  ETK71_RS01960 (ETK71_01960) hxlR 362339..362701 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14996.95 Da        Isoelectric Point: 4.8991

>NTDB_id=340683 ETK71_RS01935 WP_003246342.1 358037..358435(-) (nin/comJ) [Bacillus subtilis strain SRCM103622]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILFRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=340683 ETK71_RS01935 WP_003246342.1 358037..358435(-) (nin/comJ) [Bacillus subtilis strain SRCM103622]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTTCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment