Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   ETK69_RS21990 Genome accession   NZ_CP035410
Coordinates   413847..414011 (+) Length   54 a.a.
NCBI ID   WP_269195014.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM103616     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 408847..419011
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETK69_RS21985 srfAB 410738..413827 (+) 3090 Protein_398 surfactin non-ribosomal peptide synthetase SrfAB -
  ETK69_RS21990 comS 413847..414011 (+) 165 WP_269195014.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6238.22 Da        Isoelectric Point: 11.7559

>NTDB_id=340676 ETK69_RS21990 WP_269195014.1 413847..414011(+) (comS) [Bacillus velezensis strain SRCM103616]
MRARRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=340676 ETK69_RS21990 WP_269195014.1 413847..414011(+) (comS) [Bacillus velezensis strain SRCM103616]
ATGAGAGCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTTTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5

Multiple sequence alignment