Detailed information    

insolico Bioinformatically predicted

Overview

Name   comFA   Type   Machinery gene
Locus tag   ETK69_RS18770 Genome accession   NZ_CP035410
Coordinates   3680518..3681903 (-) Length   461 a.a.
NCBI ID   WP_063636495.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM103616     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3675518..3686903
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETK69_RS18735 (ETK69_18735) flgL 3675693..3676610 (-) 918 WP_007407477.1 flagellar hook-associated protein FlgL -
  ETK69_RS18740 (ETK69_18740) flgK 3676622..3678139 (-) 1518 WP_014419008.1 flagellar hook-associated protein FlgK -
  ETK69_RS18745 (ETK69_18745) - 3678155..3678637 (-) 483 WP_129110411.1 flagellar protein FlgN -
  ETK69_RS18750 (ETK69_18750) flgM 3678652..3678918 (-) 267 WP_003151393.1 flagellar biosynthesis anti-sigma factor FlgM -
  ETK69_RS18755 (ETK69_18755) - 3678988..3679407 (-) 420 WP_014419009.1 TIGR03826 family flagellar region protein -
  ETK69_RS18760 (ETK69_18760) comFC 3679481..3680170 (-) 690 WP_199803302.1 phosphoribosyltransferase family protein Machinery gene
  ETK69_RS18765 (ETK69_18765) - 3680176..3680460 (-) 285 WP_022553866.1 competence protein ComFB -
  ETK69_RS18770 (ETK69_18770) comFA 3680518..3681903 (-) 1386 WP_063636495.1 DEAD/DEAH box helicase Machinery gene
  ETK69_RS18775 (ETK69_18775) - 3682011..3682859 (-) 849 WP_003151387.1 DegV family protein -
  ETK69_RS18780 (ETK69_18780) degU 3682957..3683646 (-) 690 WP_003219701.1 two-component system response regulator DegU Regulator
  ETK69_RS18785 (ETK69_18785) degS 3683723..3684886 (-) 1164 WP_003151385.1 two-component sensor histidine kinase DegS Regulator
  ETK69_RS18790 (ETK69_18790) - 3685109..3685756 (+) 648 WP_060657503.1 YigZ family protein -

Sequence

Protein


Download         Length: 461 a.a.        Molecular weight: 52663.08 Da        Isoelectric Point: 10.2804

>NTDB_id=340666 ETK69_RS18770 WP_063636495.1 3680518..3681903(-) (comFA) [Bacillus velezensis strain SRCM103616]
MSEGASEFSEVRDFFYGRHLLRSEIPFSDQRIKRFTEKEYITAEPSIIRRKNRYVCQRCGQSDQASFAAFWAPSAKRQIT
YCRACVMMGRADELTSLYSWNQTPENSWEPVKLSWEGTLTDGQKRAAAALTDAIKERQELLVWAVCGSGKTEMLFPGIEF
ALNHGLRVCVATPRTDVVLELLPRLNKAFEKVEVSALYGGSEDKGRLTPLMISTAHQLMRYRDIFDVMIIDEVDAFPFSA
DETLRFAVDKARKKNSALVYVTATPSDTLKKKAEAGLLKSVRIPARYHRKPLPEPRFLWCGNWKKKLQKGKLPRSVTDWV
RQKLQLQLPVFLFVPSVHVLKKTTDYFRKLNIRAEGVHAEDTFRKDKVKRFRDGRLDLLVTTTILERGVTVPKVQTCVLG
AEAPIFTESALVQIAGRTGRHYKHFSGDVVMFHFGITNGMKKAKKHIEHMNKLAQKSKLLD

Nucleotide


Download         Length: 1386 bp        

>NTDB_id=340666 ETK69_RS18770 WP_063636495.1 3680518..3681903(-) (comFA) [Bacillus velezensis strain SRCM103616]
ATGTCCGAAGGTGCTTCAGAATTTTCAGAGGTGCGGGATTTCTTTTACGGCCGGCATTTATTGAGATCTGAGATACCGTT
CTCAGACCAGCGTATCAAGCGTTTTACAGAAAAAGAATATATAACGGCCGAGCCGTCAATCATCCGCCGGAAAAACCGTT
ACGTCTGCCAACGATGCGGTCAGTCTGATCAAGCCAGCTTTGCGGCATTTTGGGCGCCCTCTGCCAAAAGGCAGATTACC
TATTGCCGTGCCTGTGTCATGATGGGAAGGGCTGATGAACTGACATCATTATATTCTTGGAATCAAACCCCTGAAAACAG
CTGGGAGCCTGTAAAGCTTTCTTGGGAAGGAACACTGACAGACGGACAGAAGCGGGCGGCCGCCGCGCTTACAGATGCGA
TAAAAGAGAGACAAGAGCTTTTAGTATGGGCGGTTTGCGGATCAGGGAAAACAGAGATGCTGTTTCCGGGTATCGAGTTT
GCGCTGAATCACGGTTTGCGCGTTTGTGTCGCAACTCCGCGTACAGATGTCGTACTTGAACTGCTGCCGAGACTGAATAA
AGCATTTGAGAAAGTCGAAGTTTCTGCTTTGTACGGCGGCAGCGAGGACAAAGGCCGCTTGACTCCGCTGATGATTTCAA
CCGCTCACCAGCTGATGCGCTACCGAGACATTTTTGATGTCATGATAATAGATGAAGTAGATGCGTTTCCTTTTTCAGCC
GATGAGACATTAAGATTCGCTGTTGATAAAGCGAGGAAGAAAAACAGCGCCCTTGTTTATGTAACGGCGACTCCTTCAGA
CACATTAAAAAAGAAGGCTGAAGCCGGTTTGCTGAAAAGCGTCCGCATACCGGCCAGATATCATCGGAAACCCCTCCCGG
AGCCGCGTTTTTTGTGGTGCGGCAATTGGAAGAAGAAGCTTCAGAAAGGAAAACTGCCGCGCTCTGTAACGGATTGGGTC
CGCCAAAAACTTCAATTACAGCTGCCGGTTTTCTTATTCGTCCCGTCTGTACACGTATTGAAAAAGACAACGGATTATTT
TCGGAAATTAAACATACGGGCAGAAGGCGTACATGCGGAAGACACATTCAGAAAGGATAAAGTGAAACGATTCAGAGACG
GCCGGCTTGACCTGCTGGTAACGACTACGATTTTAGAAAGAGGGGTTACCGTGCCCAAAGTTCAGACATGTGTCCTCGGC
GCAGAAGCACCTATCTTTACTGAGAGCGCGCTCGTACAGATCGCGGGCAGAACGGGAAGGCATTATAAACATTTCAGCGG
TGATGTCGTCATGTTTCATTTCGGAATTACAAACGGAATGAAAAAAGCAAAAAAACATATAGAACATATGAACAAATTGG
CACAAAAAAGTAAATTGTTGGACTAG

Domains

Predicted by InterproScan.

Helicase conserved C-terminal domain (Helicase_C)

(330-421)

Type III restriction enzyme, res subunit (ResIII)

(118-266)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comFA Bacillus subtilis subsp. subtilis str. 168

62.391

99.783

0.623

Multiple sequence alignment