Detailed information    

insolico Bioinformatically predicted

Overview


Name   luxS   Type   Regulator
Locus tag   FOB68_RS00715 Genome accession   NZ_CP044106
Coordinates   108747..109217 (-) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus strain FDAARGOS_660     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 103747..114217
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOB68_RS00685 (FOB68_00690) - 103787..104200 (+) 414 WP_001123298.1 thiol-disulfide oxidoreductase DCC family protein -
  FOB68_RS00690 (FOB68_00695) - 104400..104843 (+) 444 WP_000070865.1 Dps family protein -
  FOB68_RS00695 (FOB68_00700) deoD 104964..105674 (-) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  FOB68_RS00700 (FOB68_00705) deoC 105988..106650 (+) 663 WP_001083340.1 deoxyribose-phosphate aldolase -
  FOB68_RS00705 (FOB68_00710) - 106930..108231 (+) 1302 WP_001242304.1 pyrimidine-nucleoside phosphorylase -
  FOB68_RS00710 (FOB68_00715) - 108245..108595 (+) 351 WP_001024035.1 membrane protein -
  FOB68_RS00715 (FOB68_00720) luxS 108747..109217 (-) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  FOB68_RS00720 (FOB68_00725) - 109528..110712 (+) 1185 WP_001291502.1 M20 family metallopeptidase -
  FOB68_RS00725 (FOB68_00730) ldmS 110712..111905 (+) 1194 WP_000183707.1 L-aspartate--L-methionine ligase LdmS -
  FOB68_RS00730 (FOB68_00735) - 112303..112974 (+) 672 WP_000120545.1 DUF2750 domain-containing protein -
  FOB68_RS00735 (FOB68_00740) coaW 113104..113907 (-) 804 WP_000862728.1 type II pantothenate kinase -

Sequence


Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=340636 FOB68_RS00715 WP_000164421.1 108747..109217(-) (luxS) [Staphylococcus aureus strain FDAARGOS_660]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=340636 FOB68_RS00715 WP_000164421.1 108747..109217(-) (luxS) [Staphylococcus aureus strain FDAARGOS_660]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATATGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCTG
GATTGCATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTCGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains


Predicted by InterProScan.

(5-148)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB P65329

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404


Multiple sequence alignment