Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | ETK61_RS13645 | Genome accession | NZ_CP035406 |
| Coordinates | 2504670..2505707 (-) | Length | 345 a.a. |
| NCBI ID | WP_129137786.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SRCM103612 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2499670..2510707
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ETK61_RS13595 (ETK61_13600) | tasA | 2499774..2500559 (-) | 786 | WP_004398632.1 | biofilm matrix protein TasA | - |
| ETK61_RS13600 (ETK61_13605) | sipW | 2500623..2501195 (-) | 573 | WP_080031082.1 | signal peptidase I SipW | - |
| ETK61_RS13605 (ETK61_13610) | tapA | 2501179..2501934 (-) | 756 | WP_129137785.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ETK61_RS13610 (ETK61_13615) | yqzG | 2502206..2502532 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| ETK61_RS13615 (ETK61_13620) | spoIITA | 2502574..2502753 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| ETK61_RS13620 (ETK61_13625) | comGG | 2502824..2503198 (-) | 375 | WP_029726722.1 | ComG operon protein ComGG | Machinery gene |
| ETK61_RS13625 (ETK61_13630) | comGF | 2503199..2503582 (-) | 384 | WP_029317913.1 | ComG operon protein ComGF | Machinery gene |
| ETK61_RS13630 (ETK61_13635) | comGE | 2503608..2503955 (-) | 348 | WP_014480255.1 | ComG operon protein 5 | Machinery gene |
| ETK61_RS13635 (ETK61_13640) | comGD | 2503939..2504370 (-) | 432 | WP_014480256.1 | comG operon protein ComGD | Machinery gene |
| ETK61_RS13640 (ETK61_13645) | comGC | 2504360..2504656 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| ETK61_RS13645 (ETK61_13650) | comGB | 2504670..2505707 (-) | 1038 | WP_129137786.1 | comG operon protein ComGB | Machinery gene |
| ETK61_RS13650 (ETK61_13655) | comGA | 2505694..2506764 (-) | 1071 | WP_024573393.1 | competence protein ComGA | Machinery gene |
| ETK61_RS13660 (ETK61_13665) | corA | 2507177..2508130 (-) | 954 | WP_017696189.1 | magnesium transporter CorA | - |
| ETK61_RS13665 (ETK61_13670) | yqhB | 2508272..2509600 (+) | 1329 | WP_129137787.1 | hemolysin family protein | - |
| ETK61_RS13670 (ETK61_13675) | rsbRD | 2509653..2510489 (-) | 837 | WP_017696187.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39643.05 Da Isoelectric Point: 9.7153
>NTDB_id=340568 ETK61_RS13645 WP_129137786.1 2504670..2505707(-) (comGB) [Bacillus subtilis strain SRCM103612]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVVILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEHVIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVVILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEHVIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=340568 ETK61_RS13645 WP_129137786.1 2504670..2505707(-) (comGB) [Bacillus subtilis strain SRCM103612]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGGTCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACACGTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGGTCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACACGTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
98.452 |
93.623 |
0.922 |