Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ETK61_RS08130 Genome accession   NZ_CP035406
Coordinates   1521574..1522149 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103612     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1516574..1527149
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETK61_RS08100 (ETK61_08100) dapD 1516762..1517472 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  ETK61_RS08105 (ETK61_08105) dapI 1517542..1518666 (+) 1125 WP_017697280.1 N-acetyldiaminopimelate deacetylase -
  ETK61_RS08110 (ETK61_08110) ykuS 1518728..1518973 (+) 246 WP_003232382.1 YkuS family protein -
  ETK61_RS08115 (ETK61_08115) mscT 1519010..1519813 (-) 804 WP_017697281.1 small-conductance mechanosensitive channel protein MscT -
  ETK61_RS08120 (ETK61_08120) ahpA 1520050..1520592 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  ETK61_RS08125 (ETK61_08125) ykuV 1520662..1521108 (+) 447 WP_129137623.1 thiol-disulfide oxidoreductase YkuV -
  ETK61_RS08130 (ETK61_08130) rok 1521574..1522149 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  ETK61_RS08135 (ETK61_08135) cse15 1522190..1523155 (-) 966 WP_017696812.1 spore protein Cse15 -
  ETK61_RS08140 (ETK61_08140) mobA 1523292..1523891 (+) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  ETK61_RS08145 (ETK61_08145) moeB 1523942..1524961 (+) 1020 WP_129137624.1 molybdopterin-synthase adenylyltransferase MoeB -
  ETK61_RS08150 (ETK61_08150) glp 1524979..1526271 (+) 1293 WP_129137625.1 gephyrin-like molybdotransferase Glp -
  ETK61_RS08155 (ETK61_08155) mobB 1526232..1526753 (+) 522 WP_129137626.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=340551 ETK61_RS08130 WP_003232378.1 1521574..1522149(+) (rok) [Bacillus subtilis strain SRCM103612]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=340551 ETK61_RS08130 WP_003232378.1 1521574..1522149(+) (rok) [Bacillus subtilis strain SRCM103612]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment