Detailed information NTG0340541

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: ETK61_RS06455
• Genome accession: NZ_CP035406
• Coordinates: 1225818..1226771 (+)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus subtilis strain SRCM103612
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1220818..1231771

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ETK61_RS06430 (ETK61_06430)	argF	1222649..1223608 (+)	960	WP_095843628.1	ornithine carbamoyltransferase	-
ETK61_RS06435 (ETK61_06435)	yjzC	1223694..1223873 (+)	180	WP_003245356.1	YjzC family protein	-
ETK61_RS06440 (ETK61_06440)	yjzD	1223920..1224105 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
ETK61_RS06445 (ETK61_06445)	-	1224354..1225088 (+)	735	WP_041340422.1	hypothetical protein	-
ETK61_RS06450 (ETK61_06450)	-	1225170..1225727 (+)	558	WP_017695676.1	hypothetical protein	-
ETK61_RS06455 (ETK61_06455)	med	1225818..1226771 (+)	954	WP_014476425.1	transcriptional regulator Med	Regulator
ETK61_RS06460 (ETK61_06460)	comZ	1226786..1226977 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
ETK61_RS06465 (ETK61_06465)	yjzB	1227007..1227246 (-)	240	WP_003232972.1	spore coat protein YjzB	-
ETK61_RS06470 (ETK61_06470)	fabH	1227411..1228349 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
ETK61_RS06475 (ETK61_06475)	fabF	1228372..1229613 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
ETK61_RS06480 (ETK61_06480)	yjaZ	1229689..1230474 (+)	786	WP_129137580.1	DUF2268 domain-containing protein	-
ETK61_RS06485 (ETK61_06485)	appD	1230666..1231652 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=340541 ETK61_RS06455 WP_014476425.1 1225818..1226771(+) (med) [Bacillus subtilis strain SRCM103612]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=340541 ETK61_RS06455 WP_014476425.1 1225818..1226771(+) (med) [Bacillus subtilis strain SRCM103612]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGTTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAATAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997