Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   FOB62_RS00695 Genome accession   NZ_CP044102
Coordinates   137673..139418 (-) Length   581 a.a.
NCBI ID   WP_003056245.1    Uniprot ID   A0ABU0A705
Organism   Streptococcus dysgalactiae strain FDAARGOS_654     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 132673..144418
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOB62_RS00680 (FOB62_00680) - 133827..134237 (-) 411 WP_012766836.1 peptide deformylase -
  FOB62_RS00685 (FOB62_00685) gdhA 134362..135711 (-) 1350 WP_003056314.1 NADP-specific glutamate dehydrogenase -
  FOB62_RS00690 (FOB62_00690) rcrQ 135901..137673 (-) 1773 WP_003056332.1 ABC transporter ATP-binding protein Regulator
  FOB62_RS00695 (FOB62_00695) rcrP 137673..139418 (-) 1746 WP_003056245.1 ABC transporter ATP-binding protein Regulator
  FOB62_RS00700 (FOB62_00700) - 139526..141403 (-) 1878 WP_150336150.1 ABC-F family ATP-binding cassette domain-containing protein -
  FOB62_RS00705 (FOB62_00705) - 141400..142608 (-) 1209 WP_012766833.1 CCA tRNA nucleotidyltransferase -
  FOB62_RS00710 (FOB62_00710) - 142728..143576 (-) 849 WP_150336151.1 DegV family protein -
  FOB62_RS00715 (FOB62_00715) - 143576..143956 (-) 381 WP_003056276.1 DUF1149 family protein -

Sequence

Protein


Download         Length: 581 a.a.        Molecular weight: 65196.82 Da        Isoelectric Point: 5.6010

>NTDB_id=340538 FOB62_RS00695 WP_003056245.1 137673..139418(-) (rcrP) [Streptococcus dysgalactiae strain FDAARGOS_654]
MGLIWSYLSSKPKWLALDILGGLLFVLVNLGLPTILARMIDQGILQQDTKALYGWTLVMFVIIVLGVLGRIILSYASGKL
TTTMIKELRNDMYRQLQDYSHTEYEKIGVASLVTRMTSDAFVLMQFAEMSLRLGVVTPLMMIFSVLMIFLTSPSLAWIVA
VSMPFLVLVVVYVAVKTRPLSEKQQESLDHINQLVRENLTGLRVIRAFSREAFQQERFDERNQEYAGISKRLFTLTGLTE
PLFVQIIIAMIVAIVWFALDPLAKGQIQIGDLVAFIEYSFHALFSFLMFANLFTMYPKMAVSSKRIKEVMDMPISISKNE
DGVTETLTRGYLEFDNVTFAYPGETESPVLHNISFKTKPGETIAFIGSTGSGKSSLVNLIPRFYDVTFGRILVDGVDVRD
YQLKSLRAKIGFIPQKALLFTGTIEDNLKYGKADASYWELDEATDVSQARAFIASREKGYQTHLAEAGSNLSGGQKQRLS
IARAVVKKPDIYIFDDSFSALDYQTDAALRKRLKEVTEEATVLIVAQRVGTIMDADQIIVLDQGEIVGRGKHEELMATNA
IYREIADSQLNKGNLMEEEVD

Nucleotide


Download         Length: 1746 bp        

>NTDB_id=340538 FOB62_RS00695 WP_003056245.1 137673..139418(-) (rcrP) [Streptococcus dysgalactiae strain FDAARGOS_654]
ATGGGACTGATTTGGTCGTATTTATCATCAAAGCCTAAGTGGTTGGCTTTGGACATTTTAGGTGGTCTATTATTTGTTCT
GGTTAATTTAGGATTGCCCACTATTTTAGCTCGGATGATAGACCAAGGAATCTTGCAGCAGGATACCAAAGCCTTATATG
GCTGGACATTGGTCATGTTTGTCATTATTGTGTTAGGTGTTCTTGGTCGAATTATCTTATCCTATGCATCTGGTAAGTTA
ACGACAACCATGATCAAGGAGCTGCGCAATGACATGTATCGTCAGTTGCAGGATTACTCTCATACAGAATATGAAAAAAT
TGGGGTTGCTTCTTTGGTTACCCGAATGACAAGTGATGCCTTTGTGCTCATGCAGTTTGCTGAAATGTCTTTACGTTTAG
GAGTAGTGACGCCCTTAATGATGATTTTTTCAGTGCTGATGATTTTCTTGACAAGTCCATCGTTAGCATGGATTGTGGCG
GTATCCATGCCTTTTTTGGTGCTGGTTGTTGTTTATGTCGCCGTCAAAACAAGGCCTCTCTCTGAAAAACAACAAGAAAG
TCTAGACCACATTAATCAGTTAGTCAGAGAAAATTTGACTGGTTTGCGCGTGATTAGAGCCTTTTCGAGAGAAGCATTTC
AACAGGAACGTTTTGATGAGCGTAATCAAGAATACGCCGGCATTTCTAAACGTCTCTTCACCTTAACAGGATTGACAGAA
CCGCTATTTGTGCAAATCATTATTGCCATGATTGTAGCCATTGTTTGGTTTGCCTTAGACCCTTTGGCTAAGGGACAAAT
TCAAATTGGGGATTTGGTAGCCTTTATCGAGTATAGTTTTCATGCCCTTTTTTCGTTTTTGATGTTTGCTAATCTCTTTA
CCATGTATCCTAAAATGGCAGTTTCCAGCAAACGGATCAAAGAAGTCATGGACATGCCAATCTCTATTTCTAAAAATGAA
GATGGGGTAACAGAGACCTTGACAAGAGGTTACCTCGAATTTGACAATGTCACCTTTGCCTATCCTGGAGAAACAGAAAG
TCCTGTTCTACATAACATTTCTTTTAAAACCAAGCCTGGGGAAACCATCGCTTTTATTGGCTCAACAGGGTCAGGAAAGT
CATCCTTGGTGAATTTAATTCCTCGATTTTACGACGTGACGTTTGGGAGAATCTTGGTCGATGGGGTAGATGTCAGAGAT
TATCAGTTAAAATCTCTTCGTGCTAAAATTGGTTTCATCCCACAAAAAGCTCTGCTATTTACAGGAACTATCGAAGACAA
TTTAAAATATGGTAAGGCAGATGCTAGCTATTGGGAATTAGATGAAGCTACGGATGTGTCTCAAGCTAGAGCATTTATTG
CTAGCCGCGAAAAAGGCTATCAGACTCATCTAGCAGAAGCAGGAAGCAATTTATCAGGTGGTCAGAAACAACGGCTATCG
ATTGCCCGTGCGGTTGTTAAAAAACCCGATATTTATATCTTTGATGATTCTTTTTCGGCACTGGATTACCAAACCGATGC
TGCTTTAAGGAAGCGCCTGAAAGAAGTAACAGAGGAAGCGACTGTTTTGATTGTAGCTCAACGGGTTGGGACTATCATGG
ATGCCGATCAAATCATCGTTCTAGATCAAGGTGAAATTGTCGGTCGAGGCAAGCATGAGGAATTGATGGCAACCAATGCT
ATTTACCGTGAAATTGCTGATTCGCAATTAAACAAAGGAAATCTCATGGAAGAGGAGGTGGACTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(350-497)

ABC transporter transmembrane region (ABC_membrane)

(26-280)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.962

91.738

0.367

Multiple sequence alignment