Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ETK61_RS04725 Genome accession   NZ_CP035406
Coordinates   913222..914016 (+) Length   264 a.a.
NCBI ID   WP_041332784.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103612     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 908222..919016
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETK61_RS04695 (ETK61_04695) sxzA 909062..910093 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  ETK61_RS04700 (ETK61_04700) yfhB 910208..911088 (+) 881 Protein_870 PhzF family phenazine biosynthesis isomerase -
  ETK61_RS04705 (ETK61_04705) yfhC 911176..911760 (+) 585 WP_003243940.1 nitroreductase -
  ETK61_RS04710 (ETK61_04710) yfhD 911799..911990 (-) 192 WP_003233561.1 YfhD family protein -
  ETK61_RS04715 (ETK61_04715) yfhE 912057..912167 (-) 111 WP_003223230.1 YfhE family protein -
  ETK61_RS04720 (ETK61_04720) yfhF 912222..913133 (-) 912 WP_129137530.1 TIGR01777 family oxidoreductase -
  ETK61_RS04725 (ETK61_04725) recX 913222..914016 (+) 795 WP_041332784.1 recombination regulator RecX Regulator
  ETK61_RS04730 (ETK61_04730) yfhH 914018..914332 (+) 315 WP_003244592.1 YfhH family protein -
  ETK61_RS04735 (ETK61_04735) yfhI 914475..915668 (+) 1194 WP_072557044.1 MFS transporter -
  ETK61_RS04740 (ETK61_04740) sspK 915700..915852 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  ETK61_RS04745 (ETK61_04745) yfhJ 915977..916246 (+) 270 WP_003243789.1 YfhJ family protein -
  ETK61_RS04750 (ETK61_04750) - 916357..917507 (+) 1151 WP_087614160.1 IS3 family transposase -
  ETK61_RS04755 (ETK61_04755) yfhK 917680..918198 (+) 519 WP_003243363.1 SH3 domain-containing protein -
  ETK61_RS04760 (ETK61_04760) spdL 918283..918615 (+) 333 WP_129137531.1 SdpC immunity protein SpdL -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31057.24 Da        Isoelectric Point: 6.6686

>NTDB_id=340533 ETK61_RS04725 WP_041332784.1 913222..914016(+) (recX) [Bacillus subtilis strain SRCM103612]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFASAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELRQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=340533 ETK61_RS04725 WP_041332784.1 913222..914016(+) (recX) [Bacillus subtilis strain SRCM103612]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCTCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAGGATCAGACAAGGGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAACTTTCGACGAAAGAACTCAGACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992

Multiple sequence alignment