Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Machinery gene
Locus tag   ETA15_RS14690 Genome accession   NZ_CP035403
Coordinates   2712044..2712790 (-) Length   248 a.a.
NCBI ID   WP_072592551.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103581     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2707044..2717790
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA15_RS14665 (ETA15_14665) mreC 2707450..2708322 (-) 873 WP_003222609.1 rod shape-determining protein MreC -
  ETA15_RS14670 (ETA15_14670) mreB 2708353..2709366 (-) 1014 WP_003229650.1 cell shape-determining protein MreB -
  ETA15_RS14675 (ETA15_14675) radC 2709458..2710153 (-) 696 WP_003246034.1 DNA repair protein RadC -
  ETA15_RS14680 (ETA15_14680) maf 2710190..2710759 (-) 570 WP_004398496.1 Maf family nucleotide pyrophosphatase -
  ETA15_RS14685 (ETA15_14685) spoIIB 2710912..2711910 (-) 999 WP_041339276.1 stage II sporulation protein SpoIIB -
  ETA15_RS14690 (ETA15_14690) comC 2712044..2712790 (-) 747 WP_072592551.1 A24 family peptidase Machinery gene
  ETA15_RS14695 (ETA15_14695) folC 2712931..2714223 (-) 1293 WP_041339279.1 folylpolyglutamate synthase/dihydrofolate synthase family protein -
  ETA15_RS14700 (ETA15_14700) valS 2714283..2716925 (-) 2643 WP_017697542.1 valine--tRNA ligase -
  ETA15_RS14705 (ETA15_14705) - 2717373..2717564 (+) 192 WP_003222590.1 hypothetical protein -

Sequence

Protein


Download         Length: 248 a.a.        Molecular weight: 26422.99 Da        Isoelectric Point: 9.7944

>NTDB_id=340352 ETA15_RS14690 WP_072592551.1 2712044..2712790(-) (comC) [Bacillus subtilis strain SRCM103581]
MLSILFIFGLILGSFYYTAGCRIPLHLSIIAPRSSCPFCRRTLTPAELIPILSFLFQKGKCKSCGHRISFMYPAAELVTA
CLFAAAGIRFGTSLELFPAVVFISLLIIVAVTDIHFMLIPNRILIFFLPFLAAARLISPLDSWYAGLLGAAAGFLFLAVI
AAITHGGVGGGDIKLFAVIGFVLGVKMLAAAFFFSVLIGALYGAAAVLTGRLAKRQPLPFAPAIAAGSILAYLYGDSIIS
FYIKMALG

Nucleotide


Download         Length: 747 bp        

>NTDB_id=340352 ETA15_RS14690 WP_072592551.1 2712044..2712790(-) (comC) [Bacillus subtilis strain SRCM103581]
ATGCTATCCATTCTTTTTATCTTCGGGCTTATCCTTGGTTCTTTTTACTATACGGCCGGGTGCCGTATCCCCTTACATCT
ATCTATTATTGCGCCCCGTTCATCATGCCCGTTTTGCCGGCGGACATTAACTCCTGCAGAATTAATTCCCATCCTGTCAT
TCCTATTTCAAAAAGGTAAATGTAAAAGCTGCGGGCATAGGATTTCTTTTATGTATCCCGCAGCAGAGCTTGTGACAGCG
TGTTTATTTGCTGCCGCAGGAATACGCTTTGGCACGTCGCTGGAACTGTTTCCCGCTGTAGTGTTTATCTCTCTTCTCAT
TATTGTTGCAGTGACAGATATTCATTTTATGCTGATTCCAAATCGTATATTGATTTTCTTTCTTCCCTTTTTGGCGGCCG
CGAGATTGATTTCTCCGCTTGATTCCTGGTATGCAGGCCTGTTAGGTGCGGCAGCCGGATTTCTATTTCTGGCTGTAATT
GCCGCAATCACCCATGGGGGAGTAGGGGGAGGAGATATTAAATTATTTGCGGTGATTGGCTTTGTGCTTGGTGTGAAAAT
GCTGGCAGCTGCCTTTTTCTTTTCTGTTTTGATAGGTGCATTATATGGAGCGGCAGCCGTTCTGACTGGTAGACTCGCTA
AAAGGCAGCCGCTTCCCTTTGCCCCCGCTATAGCCGCAGGGAGCATTTTAGCCTATTTATACGGTGACTCTATCATTTCT
TTTTATATCAAAATGGCATTGGGCTGA

Domains

Predicted by InterproScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(7-90)

Type IV leader peptidase family (Peptidase_A24)

(101-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Bacillus subtilis subsp. subtilis str. 168

99.597

100

0.996

Multiple sequence alignment