Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ETA15_RS08335 Genome accession   NZ_CP035403
Coordinates   1562552..1563016 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain SRCM103581     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1557552..1568016
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA15_RS08315 (ETA15_08315) kinA 1558019..1559839 (+) 1821 WP_014476652.1 sporulation histidine kinase KinA -
  ETA15_RS08320 (ETA15_08320) dapX 1559849..1561030 (-) 1182 WP_014476653.1 aminotransferase A -
  ETA15_RS08325 (ETA15_08325) - 1561232..1561393 (-) 162 WP_003245246.1 hypothetical protein -
  ETA15_RS08330 (ETA15_08330) cheV 1561597..1562508 (+) 912 WP_041054806.1 chemotaxis protein CheV -
  ETA15_RS08335 (ETA15_08335) kre 1562552..1563016 (-) 465 WP_003232406.1 YkyB family protein Regulator
  ETA15_RS08340 (ETA15_08340) ykuC 1563142..1564434 (-) 1293 WP_017697269.1 MFS transporter -
  ETA15_RS08345 (ETA15_08345) ltdD 1564510..1565004 (-) 495 WP_072557193.1 L,D-transpeptidase family protein -
  ETA15_RS08350 (ETA15_08350) ppeE 1565061..1565921 (-) 861 WP_017697271.1 metallophosphoesterase -
  ETA15_RS08355 (ETA15_08355) fadH 1566064..1566828 (+) 765 WP_017697272.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=340326 ETA15_RS08335 WP_003232406.1 1562552..1563016(-) (kre) [Bacillus subtilis strain SRCM103581]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=340326 ETA15_RS08335 WP_003232406.1 1562552..1563016(-) (kre) [Bacillus subtilis strain SRCM103581]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCCAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment