Detailed information    

insolico Bioinformatically predicted

Overview


Name   med   Type   Regulator
Locus tag   ETA15_RS06735 Genome accession   NZ_CP035403
Coordinates   1280831..1281784 (+) Length   317 a.a.
NCBI ID   WP_041340417.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103581     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 1275831..1286784
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA15_RS06710 (ETA15_06710) argF 1277662..1278621 (+) 960 WP_003232980.1 ornithine carbamoyltransferase -
  ETA15_RS06715 (ETA15_06715) yjzC 1278707..1278886 (+) 180 WP_003245356.1 YjzC family protein -
  ETA15_RS06720 (ETA15_06720) yjzD 1278933..1279118 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  ETA15_RS06725 (ETA15_06725) - 1279367..1280101 (+) 735 WP_017695675.1 hypothetical protein -
  ETA15_RS06730 (ETA15_06730) - 1280183..1280740 (+) 558 WP_017695676.1 hypothetical protein -
  ETA15_RS06735 (ETA15_06735) med 1280831..1281784 (+) 954 WP_041340417.1 transcriptional regulator Med Regulator
  ETA15_RS06740 (ETA15_06740) comZ 1281799..1281990 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  ETA15_RS06745 (ETA15_06745) yjzB 1282020..1282259 (-) 240 WP_003232972.1 spore coat protein YjzB -
  ETA15_RS06750 (ETA15_06750) fabH 1282424..1283362 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  ETA15_RS06755 (ETA15_06755) fabF 1283385..1284626 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  ETA15_RS06760 (ETA15_06760) yjaZ 1284702..1285487 (+) 786 WP_017695678.1 DUF2268 domain-containing protein -
  ETA15_RS06765 (ETA15_06765) appD 1285679..1286665 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence


Protein


Download         Length: 317 a.a.        Molecular weight: 35282.79 Da        Isoelectric Point: 4.6031

>NTDB_id=340317 ETA15_RS06735 WP_041340417.1 1280831..1281784(+) (med) [Bacillus subtilis strain SRCM103581]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIVNAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKSNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=340317 ETA15_RS06735 WP_041340417.1 1280831..1281784(+) (med) [Bacillus subtilis strain SRCM103581]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCGTAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGTAGTGAATATGCTGAGGTGTTTAACCTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGTGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAATCGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGTTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

99.054

100

0.991


Multiple sequence alignment