Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | FOB78_RS04810 | Genome accession | NZ_CP044090 |
| Coordinates | 957805..958401 (-) | Length | 198 a.a. |
| NCBI ID | WP_000966735.1 | Uniprot ID | Q3K1U0 |
| Organism | Streptococcus agalactiae strain FDAARGOS_670 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 952805..963401
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOB78_RS04790 (FOB78_04790) | - | 952882..953568 (-) | 687 | WP_000569006.1 | YwaF family protein | - |
| FOB78_RS04795 (FOB78_04795) | - | 953697..954917 (-) | 1221 | WP_032458559.1 | OFA family MFS transporter | - |
| FOB78_RS04800 (FOB78_04800) | murF | 955104..956471 (-) | 1368 | WP_000777517.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
| FOB78_RS04805 (FOB78_04805) | - | 956618..957664 (-) | 1047 | WP_000032513.1 | D-alanine--D-alanine ligase | - |
| FOB78_RS04810 (FOB78_04810) | recR | 957805..958401 (-) | 597 | WP_000966735.1 | recombination mediator RecR | Machinery gene |
| FOB78_RS04815 (FOB78_04815) | pbp2b | 958416..960461 (-) | 2046 | WP_000934666.1 | penicillin-binding protein PBP2B | - |
| FOB78_RS04820 (FOB78_04820) | - | 960590..961282 (-) | 693 | WP_000240135.1 | phosphoglycerate mutase | - |
| FOB78_RS04825 (FOB78_04825) | tpiA | 961459..962217 (-) | 759 | WP_000087883.1 | triose-phosphate isomerase | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21619.82 Da Isoelectric Point: 4.5632
>NTDB_id=340264 FOB78_RS04810 WP_000966735.1 957805..958401(-) (recR) [Streptococcus agalactiae strain FDAARGOS_670]
MLYPTPIAKLIDSFSKLPGIGTKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCGNLTDDDPCLICTDKTRDQS
VILVVEDSKDVSAMEKIQEYNGLYHVLHGLISPMNGISPDDINLKSLITRLMDGQVTEVIVATNATADGEATSMYISRVL
KPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL
MLYPTPIAKLIDSFSKLPGIGTKTATRLAFYTIGMSDEDVNEFAKNLLAAKRELTYCSVCGNLTDDDPCLICTDKTRDQS
VILVVEDSKDVSAMEKIQEYNGLYHVLHGLISPMNGISPDDINLKSLITRLMDGQVTEVIVATNATADGEATSMYISRVL
KPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL
Nucleotide
Download Length: 597 bp
>NTDB_id=340264 FOB78_RS04810 WP_000966735.1 957805..958401(-) (recR) [Streptococcus agalactiae strain FDAARGOS_670]
ATGCTTTACCCAACACCAATTGCTAAATTGATTGACAGCTTTTCAAAATTACCGGGTATAGGTACTAAAACAGCAACACG
TTTAGCTTTTTACACCATTGGTATGAGTGATGAAGATGTTAATGAATTTGCTAAGAATTTATTAGCTGCTAAGCGGGAAT
TAACCTATTGTTCTGTTTGTGGTAATTTGACTGATGATGATCCTTGCTTAATTTGTACAGATAAGACGCGTGACCAGTCT
GTTATCTTGGTTGTTGAAGATAGTAAAGATGTGTCAGCTATGGAAAAAATTCAAGAGTATAATGGTTTGTATCATGTCTT
ACATGGCTTAATTTCACCTATGAATGGTATTAGCCCTGATGACATTAATTTGAAAAGTTTAATTACTCGATTGATGGATG
GTCAGGTGACAGAAGTTATTGTTGCTACCAATGCGACTGCTGATGGTGAAGCTACATCAATGTATATTTCACGAGTCTTA
AAACCAGCTGGTATCAAAGTGACACGATTAGCGAGAGGTTTAGCTGTTGGTTCAGATATCGAATATGCAGATGAAGTAAC
CTTGCTTCGAGCAATCGAAAATCGTACAGAGTTATAA
ATGCTTTACCCAACACCAATTGCTAAATTGATTGACAGCTTTTCAAAATTACCGGGTATAGGTACTAAAACAGCAACACG
TTTAGCTTTTTACACCATTGGTATGAGTGATGAAGATGTTAATGAATTTGCTAAGAATTTATTAGCTGCTAAGCGGGAAT
TAACCTATTGTTCTGTTTGTGGTAATTTGACTGATGATGATCCTTGCTTAATTTGTACAGATAAGACGCGTGACCAGTCT
GTTATCTTGGTTGTTGAAGATAGTAAAGATGTGTCAGCTATGGAAAAAATTCAAGAGTATAATGGTTTGTATCATGTCTT
ACATGGCTTAATTTCACCTATGAATGGTATTAGCCCTGATGACATTAATTTGAAAAGTTTAATTACTCGATTGATGGATG
GTCAGGTGACAGAAGTTATTGTTGCTACCAATGCGACTGCTGATGGTGAAGCTACATCAATGTATATTTCACGAGTCTTA
AAACCAGCTGGTATCAAAGTGACACGATTAGCGAGAGGTTTAGCTGTTGGTTCAGATATCGAATATGCAGATGAAGTAAC
CTTGCTTCGAGCAATCGAAAATCGTACAGAGTTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Streptococcus pneumoniae R6 |
88.384 |
100 |
0.884 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
66.667 |
100 |
0.667 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
49.231 |
98.485 |
0.485 |