Detailed information    

insolico Bioinformatically predicted

Overview


Name   comZ   Type   Regulator
Locus tag   ES969_RS06225 Genome accession   NZ_CP035402
Coordinates   1188981..1189172 (+) Length   63 a.a.
NCBI ID   WP_046380930.1    Uniprot ID   A0AA96V089
Organism   Bacillus subtilis strain SRCM103576     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context


Location: 1183981..1194172
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES969_RS06200 (ES969_06200) yjzC 1185889..1186068 (+) 180 WP_003245356.1 YjzC family protein -
  ES969_RS06205 (ES969_06205) yjzD 1186115..1186300 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  ES969_RS06210 (ES969_06210) - 1186549..1187283 (+) 735 WP_014479433.1 hypothetical protein -
  ES969_RS06215 (ES969_06215) - 1187365..1187922 (+) 558 WP_014479435.1 hypothetical protein -
  ES969_RS06220 (ES969_06220) med 1188013..1188966 (+) 954 WP_069837427.1 transcriptional regulator Med Regulator
  ES969_RS06225 (ES969_06225) comZ 1188981..1189172 (+) 192 WP_046380930.1 ComG operon transcriptional repressor ComZ Regulator
  ES969_RS06230 (ES969_06230) yjzB 1189202..1189441 (-) 240 WP_003232972.1 spore coat protein YjzB -
  ES969_RS06235 (ES969_06235) fabH 1189606..1190544 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  ES969_RS06240 (ES969_06240) fabF 1190567..1191808 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  ES969_RS06245 (ES969_06245) yjaZ 1191884..1192669 (+) 786 WP_003232967.1 DUF2268 domain-containing protein -
  ES969_RS06250 (ES969_06250) appD 1192861..1193847 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence


Protein


Download         Length: 63 a.a.        Molecular weight: 7282.31 Da        Isoelectric Point: 4.2564

>NTDB_id=340239 ES969_RS06225 WP_046380930.1 1188981..1189172(+) (comZ) [Bacillus subtilis strain SRCM103576]
MQHEKSLEFLQIAMKYFPEAKEQFEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=340239 ES969_RS06225 WP_046380930.1 1188981..1189172(+) (comZ) [Bacillus subtilis strain SRCM103576]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATTTCCCTGAAGCGAAAGAACAGTTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains


Predicted by InterproScan.

(4-58)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

96.825

100

0.968


Multiple sequence alignment