Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ES969_RS04650 Genome accession   NZ_CP035402
Coordinates   899978..900772 (+) Length   264 a.a.
NCBI ID   WP_041332784.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103576     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 894978..905772
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES969_RS04620 (ES969_04620) sxzA 895818..896849 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  ES969_RS04625 (ES969_04625) yfhB 896964..897844 (+) 881 Protein_854 PhzF family phenazine biosynthesis isomerase -
  ES969_RS04630 (ES969_04630) yfhC 897932..898516 (+) 585 WP_032723010.1 nitroreductase -
  ES969_RS04635 (ES969_04635) yfhD 898555..898746 (-) 192 WP_003233561.1 YfhD family protein -
  ES969_RS04640 (ES969_04640) yfhE 898813..898923 (-) 111 WP_003223230.1 YfhE family protein -
  ES969_RS04645 (ES969_04645) yfhF 898978..899889 (-) 912 WP_041332787.1 TIGR01777 family oxidoreductase -
  ES969_RS04650 (ES969_04650) recX 899978..900772 (+) 795 WP_041332784.1 recombination regulator RecX Regulator
  ES969_RS04655 (ES969_04655) yfhH 900774..901088 (+) 315 WP_003244592.1 YfhH family protein -
  ES969_RS04660 (ES969_04660) yfhI 901231..902424 (+) 1194 WP_003243500.1 MFS transporter -
  ES969_RS04665 (ES969_04665) sspK 902456..902608 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  ES969_RS04670 (ES969_04670) yfhJ 902733..903002 (+) 270 WP_003243789.1 YfhJ family protein -
  ES969_RS04675 (ES969_04675) yfhK 903147..903665 (+) 519 WP_014479218.1 SH3 domain-containing protein -
  ES969_RS04680 (ES969_04680) spdL 903750..904082 (+) 333 WP_014479219.1 SdpC immunity protein SpdL -
  ES969_RS04685 (ES969_04685) ephM 904069..904929 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31057.24 Da        Isoelectric Point: 6.6686

>NTDB_id=340231 ES969_RS04650 WP_041332784.1 899978..900772(+) (recX) [Bacillus subtilis strain SRCM103576]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFASAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELRQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=340231 ES969_RS04650 WP_041332784.1 899978..900772(+) (recX) [Bacillus subtilis strain SRCM103576]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCTCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAGGATCAGACAAGGGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAACTTTCGACGAAAGAACTCAGACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992

Multiple sequence alignment