Detailed information
Bioinformatically predicted
Overview
| Name | qstR | Type | Regulator |
| Locus tag | FOB70_RS08345 | Genome accession | NZ_CP044070 |
| Coordinates | 1735801..1736457 (+) | Length | 218 a.a. |
| NCBI ID | WP_005462983.1 | Uniprot ID | Q87G71 |
| Organism | Vibrio parahaemolyticus strain FDAARGOS_662 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1730801..1741457
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOB70_RS08320 (FOB70_08320) | - | 1731191..1732147 (-) | 957 | WP_005499739.1 | MoxR family ATPase | - |
| FOB70_RS08330 (FOB70_08330) | - | 1732463..1734379 (+) | 1917 | WP_005499735.1 | methyl-accepting chemotaxis protein | - |
| FOB70_RS08335 (FOB70_08335) | - | 1734436..1734636 (+) | 201 | WP_005499728.1 | chromosome segregation ATPase | - |
| FOB70_RS08340 (FOB70_08340) | - | 1734904..1735575 (+) | 672 | WP_005499727.1 | LuxR C-terminal-related transcriptional regulator | - |
| FOB70_RS08345 (FOB70_08345) | qstR | 1735801..1736457 (+) | 657 | WP_005462983.1 | cyclic-di-GMP-binding transcriptional regulator CpsQ | Regulator |
| FOB70_RS08350 (FOB70_08350) | - | 1736664..1737254 (+) | 591 | WP_005462984.1 | calcium-binding protein | - |
| FOB70_RS08355 (FOB70_08355) | - | 1737316..1739034 (+) | 1719 | WP_005499726.1 | type I secretion system permease/ATPase | - |
| FOB70_RS08360 (FOB70_08360) | - | 1739009..1740349 (+) | 1341 | WP_005499725.1 | HlyD family type I secretion periplasmic adaptor subunit | - |
Sequence
Protein
Download Length: 218 a.a. Molecular weight: 25148.87 Da Isoelectric Point: 6.1324
>NTDB_id=340228 FOB70_RS08345 WP_005462983.1 1735801..1736457(+) (qstR) [Vibrio parahaemolyticus strain FDAARGOS_662]
MRNIMEQYTEKPEILMLTQQSLQSENFKEMLSKNTETKITIIDAKNPSYHELIPDRYFLLVDFSVDTPSDTLVYLKDSNK
VLGTIMLNLGYDLDTEELASWPHVKGIFGPLDSMEKVCRGLGAIVKGDNWLSRRLLDQLVNYYKGKESNNVSEPAIEVEL
TRREIQVLKMLKEGGSNMEIADSLFISEHTIKSHLYNIFRKLEVKNRTQATSWAKRNL
MRNIMEQYTEKPEILMLTQQSLQSENFKEMLSKNTETKITIIDAKNPSYHELIPDRYFLLVDFSVDTPSDTLVYLKDSNK
VLGTIMLNLGYDLDTEELASWPHVKGIFGPLDSMEKVCRGLGAIVKGDNWLSRRLLDQLVNYYKGKESNNVSEPAIEVEL
TRREIQVLKMLKEGGSNMEIADSLFISEHTIKSHLYNIFRKLEVKNRTQATSWAKRNL
Nucleotide
Download Length: 657 bp
>NTDB_id=340228 FOB70_RS08345 WP_005462983.1 1735801..1736457(+) (qstR) [Vibrio parahaemolyticus strain FDAARGOS_662]
ATGAGAAACATTATGGAACAGTACACGGAAAAGCCTGAAATCCTAATGCTCACTCAACAAAGTTTACAGAGTGAAAACTT
TAAGGAAATGCTTTCTAAAAATACAGAAACGAAGATAACAATCATCGATGCTAAAAACCCTAGCTATCATGAACTCATCC
CAGATCGTTACTTTTTATTGGTTGACTTTTCAGTTGATACACCTTCTGACACTTTAGTTTATCTAAAGGATAGCAATAAA
GTGCTAGGTACTATCATGCTTAATCTGGGTTATGACTTAGATACCGAAGAGCTAGCGTCTTGGCCTCATGTCAAAGGCAT
ATTTGGTCCATTGGACTCTATGGAAAAGGTTTGTCGAGGATTAGGGGCCATTGTTAAAGGAGATAATTGGCTATCAAGAA
GATTGTTGGATCAATTGGTAAATTATTACAAAGGAAAAGAATCGAATAACGTTTCAGAGCCTGCAATTGAAGTAGAACTG
ACACGACGCGAAATTCAGGTTCTTAAAATGTTGAAGGAGGGTGGTTCAAATATGGAAATAGCTGACTCACTCTTTATCAG
CGAACATACTATTAAATCGCATCTATACAATATTTTTAGAAAGTTAGAAGTGAAAAATAGGACGCAAGCCACAAGTTGGG
CAAAAAGAAACCTCTAG
ATGAGAAACATTATGGAACAGTACACGGAAAAGCCTGAAATCCTAATGCTCACTCAACAAAGTTTACAGAGTGAAAACTT
TAAGGAAATGCTTTCTAAAAATACAGAAACGAAGATAACAATCATCGATGCTAAAAACCCTAGCTATCATGAACTCATCC
CAGATCGTTACTTTTTATTGGTTGACTTTTCAGTTGATACACCTTCTGACACTTTAGTTTATCTAAAGGATAGCAATAAA
GTGCTAGGTACTATCATGCTTAATCTGGGTTATGACTTAGATACCGAAGAGCTAGCGTCTTGGCCTCATGTCAAAGGCAT
ATTTGGTCCATTGGACTCTATGGAAAAGGTTTGTCGAGGATTAGGGGCCATTGTTAAAGGAGATAATTGGCTATCAAGAA
GATTGTTGGATCAATTGGTAAATTATTACAAAGGAAAAGAATCGAATAACGTTTCAGAGCCTGCAATTGAAGTAGAACTG
ACACGACGCGAAATTCAGGTTCTTAAAATGTTGAAGGAGGGTGGTTCAAATATGGAAATAGCTGACTCACTCTTTATCAG
CGAACATACTATTAAATCGCATCTATACAATATTTTTAGAAAGTTAGAAGTGAAAAATAGGACGCAAGCCACAAGTTGGG
CAAAAAGAAACCTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| qstR | Vibrio campbellii strain DS40M4 |
40.909 |
90.826 |
0.372 |