Detailed information NTG0340213

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ETA19_RS19655
• Genome accession: NZ_CP035401
• Coordinates: 3754547..3755692 (+)
• Length: 381 a.a.
• NCBI ID: WP_029318693.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103837
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3749547..3760692

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ETA19_RS19630 (ETA19_19630)	albF	3749563..3750843 (+)	1281	WP_128993511.1	pitrilysin family protein	-
ETA19_RS19635 (ETA19_19635)	albG	3750840..3751541 (+)	702	WP_128993512.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
ETA19_RS19640 (ETA19_19640)	ywhL	3751547..3752923 (-)	1377	WP_128993513.1	YncE family protein	-
ETA19_RS19645 (ETA19_19645)	ywhK	3752962..3754317 (-)	1356	WP_128993514.1	YncE family protein	-
ETA19_RS22035 (ETA19_19650)	-	3754314..3754544 (-)	231	WP_041334639.1	hypothetical protein	-
ETA19_RS19655 (ETA19_19655)	rapF	3754547..3755692 (+)	1146	WP_029318693.1	response regulator aspartate phosphatase RapF	Regulator
ETA19_RS19660 (ETA19_19660)	phrF	3755676..3755795 (+)	120	WP_041334633.1	phosphatase RapF inhibitor PhrF	Regulator
ETA19_RS19665 (ETA19_19665)	-	3755909..3756359 (+)	451	Protein_3795	YbaK/EbsC family protein	-
ETA19_RS19670 (ETA19_19670)	speB	3756391..3757263 (-)	873	WP_003227545.1	agmatinase	-
ETA19_RS19675 (ETA19_19675)	speE	3757324..3758154 (-)	831	WP_003227543.1	spermidine synthase	-
ETA19_RS19680 (ETA19_19680)	pbpG	3758356..3760431 (+)	2076	WP_128993515.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45594.05 Da
• Isoelectric Point: 5.0624

>NTDB_id=340213 ETA19_RS19655 WP_029318693.1 3754547..3755692(+) (rapF) [Bacillus subtilis strain SRCM103837]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=340213 ETA19_RS19655 WP_029318693.1 3754547..3755692(+) (rapF) [Bacillus subtilis strain SRCM103837]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACATATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.95	100	0.99
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572