Detailed information    

insolico Bioinformatically predicted

Overview


Name   comZ   Type   Regulator
Locus tag   ETA19_RS06190 Genome accession   NZ_CP035401
Coordinates   1197150..1197341 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain SRCM103837     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context


Location: 1192150..1202341
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA19_RS06160 (ETA19_06160) argF 1193015..1193974 (+) 960 WP_128992639.1 ornithine carbamoyltransferase -
  ETA19_RS06165 (ETA19_06165) yjzC 1194060..1194239 (+) 180 WP_003245356.1 YjzC family protein -
  ETA19_RS06170 (ETA19_06170) yjzD 1194285..1194470 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  ETA19_RS06175 (ETA19_06175) - 1194719..1195453 (+) 735 WP_033883595.1 hypothetical protein -
  ETA19_RS06180 (ETA19_06180) - 1195535..1196092 (+) 558 WP_029317608.1 hypothetical protein -
  ETA19_RS06185 (ETA19_06185) med 1196182..1197135 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  ETA19_RS06190 (ETA19_06190) comZ 1197150..1197341 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  ETA19_RS06195 (ETA19_06195) yjzB 1197371..1197601 (-) 231 WP_080265337.1 spore coat protein YjzB -
  ETA19_RS06200 (ETA19_06200) fabH 1197766..1198704 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  ETA19_RS06205 (ETA19_06205) fabF 1198727..1199968 (+) 1242 WP_128992640.1 beta-ketoacyl-ACP synthase II -
  ETA19_RS06210 (ETA19_06210) yjaZ 1200044..1200829 (+) 786 WP_017695678.1 DUF2268 domain-containing protein -
  ETA19_RS06215 (ETA19_06215) appD 1201021..1202007 (+) 987 WP_046160279.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence


Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=340159 ETA19_RS06190 WP_003224559.1 1197150..1197341(+) (comZ) [Bacillus subtilis strain SRCM103837]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=340159 ETA19_RS06190 WP_003224559.1 1197150..1197341(+) (comZ) [Bacillus subtilis strain SRCM103837]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains


Predicted by InterproScan.

(4-58)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment