Detailed information    

insolico Bioinformatically predicted

Overview


Name   nucA/comI   Type   Machinery gene
Locus tag   ETA19_RS02035 Genome accession   NZ_CP035401
Coordinates   374799..375248 (-) Length   149 a.a.
NCBI ID   WP_014475770.1    Uniprot ID   A0A0D1KPR3
Organism   Bacillus subtilis strain SRCM103837     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 369799..380248
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA19_RS01995 (ETA19_01995) - 370129..370317 (+) 189 Protein_343 hypothetical protein -
  ETA19_RS02000 (ETA19_02000) yckC 370336..370791 (+) 456 WP_029317190.1 RDD family protein -
  ETA19_RS02005 (ETA19_02005) yckD 370873..371205 (+) 333 WP_015252849.1 YckD family protein -
  ETA19_RS02010 (ETA19_02010) - 371333..371755 (+) 423 WP_174616579.1 MarR family transcriptional regulator -
  ETA19_RS02015 (ETA19_02015) - 371743..372084 (+) 342 WP_032724911.1 DUF3147 family protein -
  ETA19_RS02020 (ETA19_02020) - 372103..372831 (+) 729 WP_128992390.1 AAA family ATPase -
  ETA19_RS02025 (ETA19_02025) bglC 372904..374337 (+) 1434 WP_128992391.1 6-phospho-beta-glucosidase -
  ETA19_RS02030 (ETA19_02030) nin/comJ 374374..374772 (-) 399 WP_128992392.1 DNA-entry nuclease inhibitor Regulator
  ETA19_RS02035 (ETA19_02035) nucA/comI 374799..375248 (-) 450 WP_014475770.1 DNA-entry nuclease Machinery gene
  ETA19_RS02040 (ETA19_02040) tlpC 375416..377137 (-) 1722 WP_128992393.1 methyl-accepting chemotaxis protein TlpC -
  ETA19_RS02045 (ETA19_02045) hxlB 377248..377805 (-) 558 WP_003246343.1 6-phospho-3-hexuloisomerase -
  ETA19_RS02050 (ETA19_02050) hxlA 377811..378443 (-) 633 WP_003234604.1 3-hexulose-6-phosphate synthase -
  ETA19_RS02055 (ETA19_02055) hxlR 378675..379037 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence


Protein


Download         Length: 149 a.a.        Molecular weight: 16440.39 Da        Isoelectric Point: 4.5282

>NTDB_id=340145 ETA19_RS02035 WP_014475770.1 374799..375248(-) (nucA/comI) [Bacillus subtilis strain SRCM103837]
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDETIAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFTIQ

Nucleotide


Download         Length: 450 bp        

>NTDB_id=340145 ETA19_RS02035 WP_014475770.1 374799..375248(-) (nucA/comI) [Bacillus subtilis strain SRCM103837]
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATCGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGACACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAGGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
AGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1KPR3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

98.658

100

0.987


Multiple sequence alignment