Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | ETA19_RS00235 | Genome accession | NZ_CP035401 |
| Coordinates | 44186..44476 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain SRCM103837 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 39186..49476
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ETA19_RS00195 (ETA19_00195) | darA | 39209..39538 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| ETA19_RS00200 (ETA19_00200) | yaaR | 39551..39991 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| ETA19_RS00205 (ETA19_00205) | holB | 40003..40992 (+) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| ETA19_RS00210 (ETA19_00210) | ricT | 40995..41822 (+) | 828 | WP_003243571.1 | competence/sporulation regulator complex protein RicT | - |
| ETA19_RS00215 (ETA19_00215) | yabA | 41837..42196 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| ETA19_RS00220 (ETA19_00220) | trmNF | 42255..42998 (+) | 744 | WP_003244526.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| ETA19_RS00225 (ETA19_00225) | yazA | 42985..43284 (+) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| ETA19_RS00230 (ETA19_00230) | rsmI | 43259..44137 (+) | 879 | WP_019712967.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| ETA19_RS00235 (ETA19_00235) | abrB | 44186..44476 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| ETA19_RS00240 (ETA19_00240) | metG | 44971..46965 (+) | 1995 | WP_014662479.1 | methionine--tRNA ligase | - |
| ETA19_RS00245 (ETA19_00245) | dayD | 47045..47812 (+) | 768 | WP_014475570.1 | TatD family hydrolase | - |
| ETA19_RS00250 (ETA19_00250) | yabE | 47968..49281 (+) | 1314 | WP_046380719.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=340140 ETA19_RS00235 WP_003226760.1 44186..44476(-) (abrB) [Bacillus subtilis strain SRCM103837]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=340140 ETA19_RS00235 WP_003226760.1 44186..44476(-) (abrB) [Bacillus subtilis strain SRCM103837]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |