Detailed information
Bioinformatically predicted
Overview
| Name | letA | Type | Regulator |
| Locus tag | FOB75_RS02310 | Genome accession | NZ_CP044062 |
| Coordinates | 475505..476149 (+) | Length | 214 a.a. |
| NCBI ID | WP_005386783.1 | Uniprot ID | Q87NC3 |
| Organism | Vibrio parahaemolyticus strain FDAARGOS_667 | ||
| Function | regulate competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 470505..481149
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOB75_RS02290 (FOB75_02290) | - | 470802..471122 (-) | 321 | WP_005465080.1 | HI1450 family dsDNA-mimic protein | - |
| FOB75_RS02295 (FOB75_02295) | yeiP | 471125..471691 (-) | 567 | WP_005465079.1 | elongation factor P-like protein YeiP | - |
| FOB75_RS02300 (FOB75_02300) | - | 471878..472645 (+) | 768 | WP_017448417.1 | nucleotidyltransferase domain-containing protein | - |
| FOB75_RS02305 (FOB75_02305) | - | 472642..475005 (-) | 2364 | WP_025637877.1 | DNA polymerase II | - |
| FOB75_RS02310 (FOB75_02310) | letA | 475505..476149 (+) | 645 | WP_005386783.1 | UvrY/SirA/GacA family response regulator transcription factor | Regulator |
| FOB75_RS02315 (FOB75_02315) | uvrC | 476151..477983 (+) | 1833 | WP_150334133.1 | excinuclease ABC subunit UvrC | - |
| FOB75_RS02320 (FOB75_02320) | pgsA | 478030..478587 (+) | 558 | WP_005494716.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 23765.32 Da Isoelectric Point: 5.6509
>NTDB_id=340113 FOB75_RS02310 WP_005386783.1 475505..476149(+) (letA) [Vibrio parahaemolyticus strain FDAARGOS_667]
MINVFLVDDHELVRTGIRRIIEDVRGMNVAGEADSGEDAVKWCRSNHADVVLMDMNMPGIGGLEATKKILRVNPDVKIIV
LTVHTENPFPTKVMQAGASGYLTKGAGPDEMVNAIRVVNSGQRYISPEIAQQMALSQFSPASENPFKDLSERELQIMLMI
TKGQKVTDISEQLNLSPKTVNSYRYRLFSKLDINGDVELTHLAIRHGMLDTETL
MINVFLVDDHELVRTGIRRIIEDVRGMNVAGEADSGEDAVKWCRSNHADVVLMDMNMPGIGGLEATKKILRVNPDVKIIV
LTVHTENPFPTKVMQAGASGYLTKGAGPDEMVNAIRVVNSGQRYISPEIAQQMALSQFSPASENPFKDLSERELQIMLMI
TKGQKVTDISEQLNLSPKTVNSYRYRLFSKLDINGDVELTHLAIRHGMLDTETL
Nucleotide
Download Length: 645 bp
>NTDB_id=340113 FOB75_RS02310 WP_005386783.1 475505..476149(+) (letA) [Vibrio parahaemolyticus strain FDAARGOS_667]
TTGATTAATGTTTTCCTTGTAGATGATCACGAGCTGGTTCGCACAGGGATACGACGTATTATTGAAGACGTCCGTGGAAT
GAACGTAGCAGGAGAAGCTGACAGCGGTGAAGATGCAGTTAAATGGTGTCGCAGTAATCATGCTGACGTCGTTTTAATGG
ACATGAACATGCCTGGGATTGGCGGCTTGGAAGCCACCAAGAAAATTCTTCGCGTGAATCCAGATGTGAAAATCATCGTA
CTAACCGTTCATACGGAAAATCCGTTTCCAACCAAAGTGATGCAGGCTGGTGCTTCTGGTTATTTAACCAAAGGTGCAGG
GCCGGATGAAATGGTAAATGCAATTCGTGTGGTCAATAGTGGGCAGCGTTACATCTCTCCAGAGATAGCGCAGCAAATGG
CATTGAGCCAGTTCTCACCAGCCTCTGAAAACCCATTTAAAGATTTGTCCGAACGTGAACTGCAAATCATGCTTATGATC
ACGAAAGGTCAGAAAGTAACGGATATTTCTGAGCAACTTAACTTAAGTCCAAAGACCGTCAACAGCTACCGCTATCGACT
GTTTAGCAAGCTGGACATTAATGGTGACGTCGAGTTAACACACTTAGCGATTCGCCACGGAATGCTGGACACCGAGACCC
TTTAG
TTGATTAATGTTTTCCTTGTAGATGATCACGAGCTGGTTCGCACAGGGATACGACGTATTATTGAAGACGTCCGTGGAAT
GAACGTAGCAGGAGAAGCTGACAGCGGTGAAGATGCAGTTAAATGGTGTCGCAGTAATCATGCTGACGTCGTTTTAATGG
ACATGAACATGCCTGGGATTGGCGGCTTGGAAGCCACCAAGAAAATTCTTCGCGTGAATCCAGATGTGAAAATCATCGTA
CTAACCGTTCATACGGAAAATCCGTTTCCAACCAAAGTGATGCAGGCTGGTGCTTCTGGTTATTTAACCAAAGGTGCAGG
GCCGGATGAAATGGTAAATGCAATTCGTGTGGTCAATAGTGGGCAGCGTTACATCTCTCCAGAGATAGCGCAGCAAATGG
CATTGAGCCAGTTCTCACCAGCCTCTGAAAACCCATTTAAAGATTTGTCCGAACGTGAACTGCAAATCATGCTTATGATC
ACGAAAGGTCAGAAAGTAACGGATATTTCTGAGCAACTTAACTTAAGTCCAAAGACCGTCAACAGCTACCGCTATCGACT
GTTTAGCAAGCTGGACATTAATGGTGACGTCGAGTTAACACACTTAGCGATTCGCCACGGAATGCTGGACACCGAGACCC
TTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| letA | Legionella pneumophila str. Paris |
50.952 |
98.131 |
0.5 |
| letA | Legionella pneumophila strain ERS1305867 |
50.952 |
98.131 |
0.5 |