Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ETA18_RS07815 Genome accession   NZ_CP035400
Coordinates   1482254..1482829 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103835     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1477254..1487829
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA18_RS07785 (ETA18_07785) dapD 1477441..1478151 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  ETA18_RS07790 (ETA18_07790) dapI 1478221..1479345 (+) 1125 WP_038428899.1 N-acetyldiaminopimelate deacetylase -
  ETA18_RS07795 (ETA18_07795) ykuS 1479407..1479652 (+) 246 WP_003232382.1 YkuS family protein -
  ETA18_RS07800 (ETA18_07800) mscT 1479689..1480492 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  ETA18_RS07805 (ETA18_07805) ahpA 1480729..1481271 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  ETA18_RS07810 (ETA18_07810) ykuV 1481342..1481788 (+) 447 WP_032725606.1 thiol-disulfide oxidoreductase YkuV -
  ETA18_RS07815 (ETA18_07815) rok 1482254..1482829 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  ETA18_RS07820 (ETA18_07820) cse15 1482870..1483835 (-) 966 WP_076457764.1 spore protein Cse15 -
  ETA18_RS07825 (ETA18_07825) mobA 1483972..1484571 (+) 600 WP_003232376.1 molybdenum cofactor guanylyltransferase -
  ETA18_RS07830 (ETA18_07830) moeB 1484622..1485641 (+) 1020 WP_041335765.1 molybdopterin-synthase adenylyltransferase MoeB -
  ETA18_RS07835 (ETA18_07835) glp 1485659..1486951 (+) 1293 WP_128992763.1 gephyrin-like molybdotransferase Glp -
  ETA18_RS07840 (ETA18_07840) mobB 1486912..1487433 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=340087 ETA18_RS07815 WP_003232378.1 1482254..1482829(+) (rok) [Bacillus subtilis strain SRCM103835]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=340087 ETA18_RS07815 WP_003232378.1 1482254..1482829(+) (rok) [Bacillus subtilis strain SRCM103835]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment