Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ETA18_RS07715 Genome accession   NZ_CP035400
Coordinates   1466378..1466842 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain SRCM103835     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1461378..1471842
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA18_RS07695 (ETA18_07695) kinA 1461844..1463664 (+) 1821 WP_128992751.1 sporulation histidine kinase KinA -
  ETA18_RS07700 (ETA18_07700) dapX 1463675..1464856 (-) 1182 WP_014479654.1 aminotransferase A -
  ETA18_RS07705 (ETA18_07705) - 1465058..1465219 (-) 162 WP_128992753.1 hypothetical protein -
  ETA18_RS07710 (ETA18_07710) cheV 1465423..1466334 (+) 912 WP_009967126.1 chemotaxis protein CheV -
  ETA18_RS07715 (ETA18_07715) kre 1466378..1466842 (-) 465 WP_003232406.1 YkyB family protein Regulator
  ETA18_RS07720 (ETA18_07720) ykuC 1466968..1468260 (-) 1293 WP_128992755.1 MFS transporter -
  ETA18_RS07725 (ETA18_07725) ltdD 1468336..1468830 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  ETA18_RS07730 (ETA18_07730) ppeE 1468887..1469747 (-) 861 WP_003232400.1 metallophosphoesterase -
  ETA18_RS07735 (ETA18_07735) fadH 1469890..1470654 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=340086 ETA18_RS07715 WP_003232406.1 1466378..1466842(-) (kre) [Bacillus subtilis strain SRCM103835]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=340086 ETA18_RS07715 WP_003232406.1 1466378..1466842(-) (kre) [Bacillus subtilis strain SRCM103835]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment