Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ETA18_RS04660 Genome accession   NZ_CP035400
Coordinates   915219..916013 (+) Length   264 a.a.
NCBI ID   WP_128992557.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103835     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 910219..921013
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA18_RS04630 (ETA18_04630) sxzA 911058..912089 (+) 1032 WP_080529085.1 iron ABC transporter permease -
  ETA18_RS04635 (ETA18_04635) yfhB 912204..913085 (+) 882 WP_128992555.1 PhzF family phenazine biosynthesis isomerase -
  ETA18_RS04640 (ETA18_04640) yfhC 913173..913757 (+) 585 WP_128992556.1 nitroreductase -
  ETA18_RS04645 (ETA18_04645) yfhD 913796..913987 (-) 192 WP_003233561.1 YfhD family protein -
  ETA18_RS04650 (ETA18_04650) yfhE 914054..914164 (-) 111 WP_003223230.1 YfhE family protein -
  ETA18_RS04655 (ETA18_04655) yfhF 914219..915130 (-) 912 WP_044052591.1 TIGR01777 family oxidoreductase -
  ETA18_RS04660 (ETA18_04660) recX 915219..916013 (+) 795 WP_128992557.1 recombination regulator RecX Regulator
  ETA18_RS04665 (ETA18_04665) yfhH 916015..916335 (+) 321 WP_029726843.1 YfhH family protein -
  ETA18_RS04670 (ETA18_04670) yfhI 916472..917665 (+) 1194 WP_128992558.1 MFS transporter -
  ETA18_RS04675 (ETA18_04675) sspK 917697..917849 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  ETA18_RS04680 (ETA18_04680) yfhJ 917974..918243 (+) 270 WP_015252516.1 YfhJ family protein -
  ETA18_RS04685 (ETA18_04685) yfhK 918388..918906 (+) 519 WP_015252515.1 SH3 domain-containing protein -
  ETA18_RS04690 (ETA18_04690) spdL 918991..919323 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  ETA18_RS04695 (ETA18_04695) ephM 919310..920170 (+) 861 WP_128992559.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31063.25 Da        Isoelectric Point: 6.6686

>NTDB_id=340069 ETA18_RS04660 WP_128992557.1 915219..916013(+) (recX) [Bacillus subtilis strain SRCM103835]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFASAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=340069 ETA18_RS04660 WP_128992557.1 915219..916013(+) (recX) [Bacillus subtilis strain SRCM103835]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCTCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGGGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992

Multiple sequence alignment