Detailed information    

insolico Bioinformatically predicted

Overview


Name   nin/comJ   Type   Regulator
Locus tag   ETA18_RS02030 Genome accession   NZ_CP035400
Coordinates   374373..374771 (-) Length   132 a.a.
NCBI ID   WP_128992392.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103835     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context


Location: 369373..379771
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA18_RS01995 (ETA18_01995) - 370128..370316 (+) 189 Protein_343 hypothetical protein -
  ETA18_RS02000 (ETA18_02000) yckC 370335..370790 (+) 456 WP_029317190.1 RDD family protein -
  ETA18_RS02005 (ETA18_02005) yckD 370872..371204 (+) 333 WP_015252849.1 YckD family protein -
  ETA18_RS02010 (ETA18_02010) - 371332..371754 (+) 423 WP_174616579.1 MarR family transcriptional regulator -
  ETA18_RS02015 (ETA18_02015) - 371742..372083 (+) 342 WP_032724911.1 DUF3147 family protein -
  ETA18_RS02020 (ETA18_02020) - 372102..372830 (+) 729 WP_128992390.1 AAA family ATPase -
  ETA18_RS02025 (ETA18_02025) bglC 372903..374336 (+) 1434 WP_128992391.1 6-phospho-beta-glucosidase -
  ETA18_RS02030 (ETA18_02030) nin/comJ 374373..374771 (-) 399 WP_128992392.1 DNA-entry nuclease inhibitor Regulator
  ETA18_RS02035 (ETA18_02035) nucA/comI 374798..375247 (-) 450 WP_014475770.1 DNA-entry nuclease Machinery gene
  ETA18_RS02040 (ETA18_02040) tlpC 375415..377136 (-) 1722 WP_128992393.1 methyl-accepting chemotaxis protein TlpC -
  ETA18_RS02045 (ETA18_02045) hxlB 377247..377804 (-) 558 WP_003246343.1 6-phospho-3-hexuloisomerase -
  ETA18_RS02050 (ETA18_02050) hxlA 377810..378442 (-) 633 WP_003234604.1 3-hexulose-6-phosphate synthase -
  ETA18_RS02055 (ETA18_02055) hxlR 378674..379036 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence


Protein


Download         Length: 132 a.a.        Molecular weight: 15023.03 Da        Isoelectric Point: 4.8991

>NTDB_id=340063 ETA18_RS02030 WP_128992392.1 374373..374771(-) (nin/comJ) [Bacillus subtilis strain SRCM103835]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLFFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=340063 ETA18_RS02030 WP_128992392.1 374373..374771(-) (nin/comJ) [Bacillus subtilis strain SRCM103835]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTTCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains


Predicted by InterproScan.

(9-129)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

98.485

100

0.985


Multiple sequence alignment