Detailed information NTG0340048

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: ETA12_RS18170
• Genome accession: NZ_CP035399
• Coordinates: 3592480..3593643 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SRCM103788
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3587480..3598643

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ETA12_RS18140 (ETA12_18140)	-	3587745..3588164 (-)	420	WP_014419009.1	TIGR03826 family flagellar region protein	-
ETA12_RS18145 (ETA12_18145)	comFC	3588238..3588927 (-)	690	WP_199803302.1	phosphoribosyltransferase family protein	Machinery gene
ETA12_RS18150 (ETA12_18150)	-	3588933..3589217 (-)	285	WP_022553866.1	competence protein ComFB	-
ETA12_RS18155 (ETA12_18155)	comFA	3589275..3590660 (-)	1386	WP_063636495.1	DEAD/DEAH box helicase	Machinery gene
ETA12_RS18160 (ETA12_18160)	-	3590768..3591616 (-)	849	WP_003151387.1	DegV family protein	-
ETA12_RS18165 (ETA12_18165)	degU	3591714..3592403 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
ETA12_RS18170 (ETA12_18170)	degS	3592480..3593643 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
ETA12_RS18175 (ETA12_18175)	-	3593866..3594513 (+)	648	WP_060657503.1	YigZ family protein	-
ETA12_RS18180 (ETA12_18180)	-	3594518..3595711 (+)	1194	WP_128974134.1	LCP family protein	-
ETA12_RS18185 (ETA12_18185)	-	3595811..3596887 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
ETA12_RS18190 (ETA12_18190)	-	3597019..3598215 (-)	1197	WP_071182023.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=340048 ETA12_RS18170 WP_003151385.1 3592480..3593643(-) (degS) [Bacillus velezensis strain SRCM103788]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=340048 ETA12_RS18170 WP_003151385.1 3592480..3593643(-) (degS) [Bacillus velezensis strain SRCM103788]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTCCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948