Detailed information NTG0340011

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: ETA12_RS08100
• Genome accession: NZ_CP035399
• Coordinates: 1536560..1536844 (+)
• Length: 94 a.a.
• NCBI ID: WP_014417633.1
• Uniprot ID: I2C4H1
• Organism: Bacillus velezensis strain SRCM103788
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 1531560..1541844

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ETA12_RS08075 (ETA12_08075)	-	1532806..1533714 (+)	909	WP_025649506.1	ketopantoate reductase family protein	-
ETA12_RS08080 (ETA12_08080)	-	1533743..1534975 (-)	1233	WP_007409644.1	aminopeptidase	-
ETA12_RS08085 (ETA12_08085)	-	1535076..1535210 (-)	135	WP_003154559.1	protein YkpC	-
ETA12_RS08090 (ETA12_08090)	mreBH	1535282..1536289 (-)	1008	WP_014417632.1	cell shape-determining protein MreBH	-
ETA12_RS08100 (ETA12_08100)	abrB	1536560..1536844 (+)	285	WP_014417633.1	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	Regulator
ETA12_RS08105 (ETA12_08105)	-	1537017..1538321 (+)	1305	WP_014417634.1	ATP-binding protein	-
ETA12_RS08110 (ETA12_08110)	-	1538323..1539150 (+)	828	WP_014417635.1	gamma-glutamylcyclotransferase family protein	-
ETA12_RS08115 (ETA12_08115)	ktrC	1539191..1539856 (+)	666	WP_003154554.1	Ktr system potassium transporter KtrC	-
ETA12_RS08120 (ETA12_08120)	ade	1540005..1541738 (+)	1734	WP_106067847.1	adenine deaminase	-

Sequence

Protein

• Length: 94 a.a.
• Molecular weight: 10516.38 Da
• Isoelectric Point: 5.8979

>NTDB_id=340011 ETA12_RS08100 WP_014417633.1 1536560..1536844(+) (abrB) [Bacillus velezensis strain SRCM103788]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIVLKKYKPHGICLMTGEITSENQEYGNGKIILSPEGAK
MLLEEIEEALKGRS

Nucleotide

• Length: 285 bp

>NTDB_id=340011 ETA12_RS08100 WP_014417633.1 1536560..1536844(+) (abrB) [Bacillus velezensis strain SRCM103788]
ATGAAATCAATTGGTGTAGTAAGAAAAGTAGACGAACTCGGGCGTATTGTCATGCCGATTGAATTGAGAAGAGCATTGGA
TATCGCTATTAAAGATAGTATTGAATTTTTCGTTGACGGAGACAAAATTGTCTTAAAAAAATACAAGCCGCACGGCATTT
GCTTAATGACGGGGGAAATTACCTCCGAAAATCAGGAGTACGGCAACGGCAAAATTATTTTAAGTCCTGAAGGAGCGAAA
ATGCTGCTTGAGGAAATCGAGGAAGCGTTAAAAGGTAGATCATAA

Domains

Predicted by InterproScan.

• AbrB C-terminal domain (AbrB_C) (54-88)

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (8-51)

3D structure

• AlphaFold DB: I2C4H1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	55.435	97.872	0.543