Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ETA12_RS06370 Genome accession   NZ_CP035399
Coordinates   1208794..1208985 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain SRCM103788     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1203794..1213985
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA12_RS06335 (ETA12_06335) - 1204425..1205575 (+) 1151 WP_087614160.1 IS3 family transposase -
  ETA12_RS06340 (ETA12_06340) - 1205691..1205870 (+) 180 WP_003155070.1 YjzC family protein -
  ETA12_RS06345 (ETA12_06345) - 1205907..1206092 (-) 186 WP_007409129.1 YjzD family protein -
  ETA12_RS06355 (ETA12_06355) - 1206353..1207088 (+) 736 Protein_1185 hypothetical protein -
  ETA12_RS06360 (ETA12_06360) - 1207171..1207737 (+) 567 WP_032863798.1 hypothetical protein -
  ETA12_RS06365 (ETA12_06365) med 1207828..1208781 (+) 954 WP_017417445.1 BMP family ABC transporter substrate-binding protein Regulator
  ETA12_RS06370 (ETA12_06370) comZ 1208794..1208985 (+) 192 WP_003155061.1 ComZ family protein Regulator
  ETA12_RS06375 (ETA12_06375) - 1209014..1209232 (-) 219 WP_007409123.1 hypothetical protein -
  ETA12_RS06380 (ETA12_06380) - 1209400..1210338 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  ETA12_RS06385 (ETA12_06385) fabF 1210360..1211598 (+) 1239 WP_007610580.1 beta-ketoacyl-ACP synthase II -
  ETA12_RS06390 (ETA12_06390) - 1211682..1212467 (+) 786 WP_017417447.1 DUF2268 domain-containing protein -
  ETA12_RS06395 (ETA12_06395) - 1212641..1213627 (+) 987 WP_017417448.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=340002 ETA12_RS06370 WP_003155061.1 1208794..1208985(+) (comZ) [Bacillus velezensis strain SRCM103788]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=340002 ETA12_RS06370 WP_003155061.1 1208794..1208985(+) (comZ) [Bacillus velezensis strain SRCM103788]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794

Multiple sequence alignment