Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   ETA12_RS02010 Genome accession   NZ_CP035399
Coordinates   401951..402070 (+) Length   39 a.a.
NCBI ID   WP_003156334.1    Uniprot ID   I2C1C3
Organism   Bacillus velezensis strain SRCM103788     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 396951..407070
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA12_RS01995 (ETA12_01995) - 398563..399246 (+) 684 WP_014416901.1 response regulator transcription factor -
  ETA12_RS02000 (ETA12_02000) - 399233..400660 (+) 1428 WP_088056326.1 HAMP domain-containing sensor histidine kinase -
  ETA12_RS02005 (ETA12_02005) rapC 400819..401967 (+) 1149 WP_014304340.1 Rap family tetratricopeptide repeat protein Regulator
  ETA12_RS02010 (ETA12_02010) phrC 401951..402070 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  ETA12_RS02015 (ETA12_02015) - 402220..402315 (-) 96 WP_012116800.1 YjcZ family sporulation protein -
  ETA12_RS02020 (ETA12_02020) - 402410..403774 (-) 1365 WP_053285479.1 aspartate kinase -
  ETA12_RS02025 (ETA12_02025) ceuB 404187..405140 (+) 954 WP_014416904.1 ABC transporter permease Machinery gene
  ETA12_RS02030 (ETA12_02030) - 405130..406077 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  ETA12_RS02035 (ETA12_02035) - 406071..406829 (+) 759 WP_012116804.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4228.96 Da        Isoelectric Point: 8.0285

>NTDB_id=339990 ETA12_RS02010 WP_003156334.1 401951..402070(+) (phrC) [Bacillus velezensis strain SRCM103788]
MKLKSKWFVICLAAAAIFTVTGAGQTDQAEFHVAERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=339990 ETA12_RS02010 WP_003156334.1 401951..402070(+) (phrC) [Bacillus velezensis strain SRCM103788]
ATGAAATTGAAATCTAAATGGTTTGTTATTTGTTTAGCAGCCGCCGCGATTTTTACAGTGACAGGTGCAGGCCAGACAGA
TCAGGCTGAATTCCATGTAGCTGAAAGAGGAATGACGTGA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C1C3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

70

100

0.718

Multiple sequence alignment