Detailed information    

insolico Bioinformatically predicted

Overview


Name   nin/comJ   Type   Regulator
Locus tag   ETA10_RS02010 Genome accession   NZ_CP035397
Coordinates   368843..369241 (-) Length   132 a.a.
NCBI ID   WP_021481824.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103773     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context


Location: 363843..374241
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETA10_RS01975 (ETA10_01975) - 364707..364904 (+) 198 Protein_339 hypothetical protein -
  ETA10_RS01980 (ETA10_01980) - 364941..365261 (+) 321 Protein_340 RDD family protein -
  ETA10_RS01985 (ETA10_01985) yckD 365343..365675 (+) 333 WP_015252849.1 YckD family protein -
  ETA10_RS01990 (ETA10_01990) - 365803..366225 (+) 423 WP_201449129.1 MarR family transcriptional regulator -
  ETA10_RS01995 (ETA10_01995) - 366213..366554 (+) 342 WP_032724911.1 DUF3147 family protein -
  ETA10_RS02000 (ETA10_02000) - 366573..367301 (+) 729 WP_046160039.1 AAA family ATPase -
  ETA10_RS02005 (ETA10_02005) bglC 367373..368806 (+) 1434 WP_046160040.1 6-phospho-beta-glucosidase -
  ETA10_RS02010 (ETA10_02010) nin/comJ 368843..369241 (-) 399 WP_021481824.1 DNA-entry nuclease inhibitor Regulator
  ETA10_RS02015 (ETA10_02015) nucA/comI 369268..369717 (-) 450 WP_014475770.1 DNA-entry nuclease Machinery gene
  ETA10_RS02020 (ETA10_02020) tlpC 369885..371606 (-) 1722 WP_046160041.1 methyl-accepting chemotaxis protein TlpC -
  ETA10_RS02025 (ETA10_02025) hxlB 371716..372273 (-) 558 WP_021481820.1 6-phospho-3-hexuloisomerase -
  ETA10_RS02030 (ETA10_02030) hxlA 372279..372911 (-) 633 WP_021481819.1 3-hexulose-6-phosphate synthase -
  ETA10_RS02035 (ETA10_02035) hxlR 373143..373505 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence


Protein


Download         Length: 132 a.a.        Molecular weight: 14962.93 Da        Isoelectric Point: 4.8991

>NTDB_id=339908 ETA10_RS02010 WP_021481824.1 368843..369241(-) (nin/comJ) [Bacillus subtilis strain SRCM103773]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=339908 ETA10_RS02010 WP_021481824.1 368843..369241(-) (nin/comJ) [Bacillus subtilis strain SRCM103773]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains


Predicted by InterproScan.

(9-129)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992


Multiple sequence alignment