Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ES968_RS04585 Genome accession   NZ_CP035395
Coordinates   907282..908076 (+) Length   264 a.a.
NCBI ID   WP_041332784.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103697     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 902282..913076
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES968_RS04555 (ES968_04555) sxzA 903121..904152 (+) 1032 WP_043857890.1 iron ABC transporter permease -
  ES968_RS04560 (ES968_04560) yfhB 904267..905148 (+) 882 WP_121591549.1 PhzF family phenazine biosynthesis isomerase -
  ES968_RS04565 (ES968_04565) yfhC 905236..905820 (+) 585 WP_121591550.1 nitroreductase -
  ES968_RS04570 (ES968_04570) yfhD 905859..906050 (-) 192 WP_003233561.1 YfhD family protein -
  ES968_RS04575 (ES968_04575) yfhE 906117..906227 (-) 111 WP_003223230.1 YfhE family protein -
  ES968_RS04580 (ES968_04580) yfhF 906282..907193 (-) 912 WP_129134233.1 TIGR01777 family oxidoreductase -
  ES968_RS04585 (ES968_04585) recX 907282..908076 (+) 795 WP_041332784.1 recombination regulator RecX Regulator
  ES968_RS04590 (ES968_04590) yfhH 908078..908392 (+) 315 WP_003244592.1 YfhH family protein -
  ES968_RS04595 (ES968_04595) yfhI 908535..909728 (+) 1194 WP_072557044.1 MFS transporter -
  ES968_RS04600 (ES968_04600) sspK 909760..909912 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  ES968_RS04605 (ES968_04605) yfhJ 910037..910306 (+) 270 WP_003243789.1 YfhJ family protein -
  ES968_RS04610 (ES968_04610) - 910417..911567 (+) 1151 WP_087614160.1 IS3 family transposase -
  ES968_RS04615 (ES968_04615) yfhK 911740..912258 (+) 519 WP_003243363.1 SH3 domain-containing protein -
  ES968_RS04620 (ES968_04620) spdL 912343..912675 (+) 333 WP_014479219.1 SdpC immunity protein SpdL -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31057.24 Da        Isoelectric Point: 6.6686

>NTDB_id=339835 ES968_RS04585 WP_041332784.1 907282..908076(+) (recX) [Bacillus subtilis strain SRCM103697]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFASAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELRQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=339835 ES968_RS04585 WP_041332784.1 907282..908076(+) (recX) [Bacillus subtilis strain SRCM103697]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCTCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAGGATCAGACAAGGGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAACTTTCGACGAAAGAACTCAGACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992

Multiple sequence alignment