Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | ES967_RS12310 | Genome accession | NZ_CP035394 |
| Coordinates | 2399116..2399451 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain SRCM103696 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2394116..2404451
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ES967_RS12290 (ES967_12290) | gcvT | 2394709..2395797 (-) | 1089 | WP_015714248.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| ES967_RS12295 (ES967_12295) | hepAA | 2396238..2397911 (+) | 1674 | WP_029726726.1 | SNF2-related protein | - |
| ES967_RS12300 (ES967_12300) | yqhG | 2397932..2398726 (+) | 795 | WP_015714249.1 | YqhG family protein | - |
| ES967_RS12305 (ES967_12305) | sinI | 2398909..2399082 (+) | 174 | WP_003230187.1 | anti-repressor SinI | Regulator |
| ES967_RS12310 (ES967_12310) | sinR | 2399116..2399451 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| ES967_RS12315 (ES967_12315) | tasA | 2399544..2400329 (-) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| ES967_RS12320 (ES967_12320) | sipW | 2400393..2400965 (-) | 573 | WP_072692741.1 | signal peptidase I SipW | - |
| ES967_RS12325 (ES967_12325) | tapA | 2400949..2401710 (-) | 762 | WP_029726724.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ES967_RS12330 (ES967_12330) | yqzG | 2401982..2402308 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| ES967_RS12335 (ES967_12335) | spoIITA | 2402350..2402529 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| ES967_RS12340 (ES967_12340) | comGG | 2402601..2402975 (-) | 375 | WP_029726722.1 | ComG operon protein ComGG | Machinery gene |
| ES967_RS12345 (ES967_12345) | comGF | 2402976..2403359 (-) | 384 | WP_029726721.1 | ComG operon protein ComGF | Machinery gene |
| ES967_RS12350 (ES967_12350) | comGE | 2403385..2403732 (-) | 348 | WP_014480255.1 | ComG operon protein 5 | Machinery gene |
| ES967_RS12355 (ES967_12355) | comGD | 2403716..2404147 (-) | 432 | WP_029726720.1 | comG operon protein ComGD | Machinery gene |
| ES967_RS12360 (ES967_12360) | comGC | 2404137..2404433 (-) | 297 | WP_029726719.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=339784 ES967_RS12310 WP_003226345.1 2399116..2399451(+) (sinR) [Bacillus subtilis strain SRCM103696]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=339784 ES967_RS12310 WP_003226345.1 2399116..2399451(+) (sinR) [Bacillus subtilis strain SRCM103696]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |