Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ES967_RS04620 Genome accession   NZ_CP035394
Coordinates   902358..903152 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103696     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 897358..908152
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES967_RS04590 (ES967_04590) sxzA 898197..899228 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  ES967_RS04595 (ES967_04595) yfhB 899343..900224 (+) 882 WP_032723009.1 PhzF family phenazine biosynthesis isomerase -
  ES967_RS04600 (ES967_04600) yfhC 900312..900896 (+) 585 WP_032723010.1 nitroreductase -
  ES967_RS04605 (ES967_04605) yfhD 900935..901126 (-) 192 WP_003233561.1 YfhD family protein -
  ES967_RS04610 (ES967_04610) yfhE 901193..901303 (-) 111 WP_003223230.1 YfhE family protein -
  ES967_RS04615 (ES967_04615) yfhF 901358..902269 (-) 912 WP_033883295.1 TIGR01777 family oxidoreductase -
  ES967_RS04620 (ES967_04620) recX 902358..903152 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  ES967_RS04625 (ES967_04625) yfhH 903154..903468 (+) 315 WP_003244592.1 YfhH family protein -
  ES967_RS04630 (ES967_04630) yfhI 903611..904804 (+) 1194 WP_003243500.1 MFS transporter -
  ES967_RS04635 (ES967_04635) sspK 904836..904988 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  ES967_RS04640 (ES967_04640) yfhJ 905113..905382 (+) 270 WP_015252516.1 YfhJ family protein -
  ES967_RS04645 (ES967_04645) yfhK 905527..906045 (+) 519 WP_015252515.1 SH3 domain-containing protein -
  ES967_RS04650 (ES967_04650) spdL 906130..906462 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  ES967_RS04655 (ES967_04655) ephM 906449..907309 (+) 861 WP_003243419.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=339756 ES967_RS04620 WP_029726844.1 902358..903152(+) (recX) [Bacillus subtilis strain SRCM103696]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=339756 ES967_RS04620 WP_029726844.1 902358..903152(+) (recX) [Bacillus subtilis strain SRCM103696]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTTTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment