Detailed information NTG0339734

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: ES966_RS19065
• Genome accession: NZ_CP035393
• Coordinates: 3771255..3772400 (+)
• Length: 381 a.a.
• NCBI ID: WP_079891436.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SRCM103691
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3766255..3777400

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ES966_RS19045 (ES966_19045)	fnr	3766729..3767445 (-)	717	WP_017418713.1	fumarate/nitrate reduction transcriptional regulator Fnr	-
ES966_RS19050 (ES966_19050)	-	3767543..3768733 (-)	1191	WP_129093797.1	nitrate/nitrite transporter	-
ES966_RS19055 (ES966_19055)	argS	3768868..3770538 (-)	1671	WP_025649385.1	arginine--tRNA ligase	-
ES966_RS19060 (ES966_19060)	-	3770535..3770963 (-)	429	WP_003151069.1	DUF1934 family protein	-
ES966_RS19065 (ES966_19065)	rapF	3771255..3772400 (+)	1146	WP_079891436.1	Rap family tetratricopeptide repeat protein	Regulator
ES966_RS19070 (ES966_19070)	-	3772384..3772503 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
ES966_RS19075 (ES966_19075)	speB	3772626..3773498 (-)	873	WP_003151054.1	agmatinase	-
ES966_RS19080 (ES966_19080)	speE	3773558..3774388 (-)	831	WP_017418706.1	spermidine synthase	-
ES966_RS19085 (ES966_19085)	-	3774588..3776651 (+)	2064	Protein_3694	transglycosylase domain-containing protein	-
ES966_RS21575 (ES966_19090)	-	3776684..3777115 (-)	432	WP_017418704.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45816.31 Da
• Isoelectric Point: 5.0722

>NTDB_id=339734 ES966_RS19065 WP_079891436.1 3771255..3772400(+) (rapF) [Bacillus velezensis strain SRCM103691]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEEDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYFIYKDEKKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLENIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLESKLMYADIEELALDVAKYYYTKEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=339734 ES966_RS19065 WP_079891436.1 3771255..3772400(+) (rapF) [Bacillus velezensis strain SRCM103691]
GTGGCGAGTGTTTTATCGTCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAGCTTGCAGGCCTGGAAGAAGATCAGGATCTTCATCTGTACTATT
CTCTCATGGAATTCCGCCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGGCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTCATTTATAAAGATGAAAAAAAATACAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGAACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGCCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAGAAAATATAGATAATGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTGGAATATTTATATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAGTAAACTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACAAAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAAGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (188-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.341	100	0.703
rapC	Bacillus subtilis subsp. subtilis str. 168	53.421	99.738	0.533