Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   ES965_RS21710 Genome accession   NZ_CP035391
Coordinates   382067..382207 (+) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis strain SRCM103689     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 377067..387207
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES965_RS21705 srfAB 378931..382023 (+) 3093 Protein_346 surfactin non-ribosomal peptide synthetase SrfAB -
  ES965_RS21710 comS 382067..382207 (+) 141 WP_010886404.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=339663 ES965_RS21710 WP_010886404.1 382067..382207(+) (comS) [Bacillus subtilis strain SRCM103689]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=339663 ES965_RS21710 WP_010886404.1 382067..382207(+) (comS) [Bacillus subtilis strain SRCM103689]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment