Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   ES965_RS07720 Genome accession   NZ_CP035391
Coordinates   1463349..1463924 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM103689     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1458349..1468924
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES965_RS07690 (ES965_07690) dapD 1458537..1459247 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  ES965_RS07695 (ES965_07695) dapI 1459317..1460441 (+) 1125 WP_046380993.1 N-acetyldiaminopimelate deacetylase -
  ES965_RS07700 (ES965_07700) ykuS 1460503..1460748 (+) 246 WP_003232382.1 YkuS family protein -
  ES965_RS07705 (ES965_07705) mscT 1460785..1461588 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  ES965_RS07710 (ES965_07710) ahpA 1461825..1462367 (+) 543 WP_129092425.1 biofilm-specific peroxidase AhpA -
  ES965_RS07715 (ES965_07715) ykuV 1462437..1462883 (+) 447 WP_014476671.1 thiol-disulfide oxidoreductase YkuV -
  ES965_RS07720 (ES965_07720) rok 1463349..1463924 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  ES965_RS07725 (ES965_07725) cse15 1463965..1464930 (-) 966 WP_024571970.1 spore protein Cse15 -
  ES965_RS07730 (ES965_07730) mobA 1465067..1465666 (+) 600 WP_024571969.1 molybdenum cofactor guanylyltransferase -
  ES965_RS07735 (ES965_07735) moeB 1465717..1466736 (+) 1020 WP_124059809.1 molybdopterin-synthase adenylyltransferase MoeB -
  ES965_RS07740 (ES965_07740) glp 1466754..1468046 (+) 1293 WP_124059810.1 gephyrin-like molybdotransferase Glp -
  ES965_RS07745 (ES965_07745) mobB 1468007..1468528 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=339612 ES965_RS07720 WP_003232378.1 1463349..1463924(+) (rok) [Bacillus subtilis strain SRCM103689]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=339612 ES965_RS07720 WP_003232378.1 1463349..1463924(+) (rok) [Bacillus subtilis strain SRCM103689]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAACGAGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment