Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   ES965_RS04585 Genome accession   NZ_CP035391
Coordinates   893260..894054 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain SRCM103689     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 888260..899054
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES965_RS04555 (ES965_04555) sxzA 889098..890129 (+) 1032 WP_003243057.1 iron ABC transporter permease -
  ES965_RS04560 (ES965_04560) yfhB 890245..891126 (+) 882 WP_063335720.1 PhzF family phenazine biosynthesis protein -
  ES965_RS04565 (ES965_04565) yfhC 891214..891798 (+) 585 WP_129092338.1 nitroreductase -
  ES965_RS04570 (ES965_04570) yfhD 891837..892028 (-) 192 WP_003233561.1 YfhD family protein -
  ES965_RS04575 (ES965_04575) yfhE 892095..892205 (-) 111 WP_003223230.1 YfhE family protein -
  ES965_RS04580 (ES965_04580) yfhF 892260..893171 (-) 912 WP_129092339.1 TIGR01777 family oxidoreductase -
  ES965_RS04585 (ES965_04585) recX 893260..894054 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  ES965_RS04590 (ES965_04590) yfhH 894056..894370 (+) 315 WP_024573179.1 YfhH family protein -
  ES965_RS04600 (ES965_04600) yfhI 894513..895706 (+) 1194 WP_080010604.1 MFS transporter -
  ES965_RS04605 (ES965_04605) sspK 895739..895891 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  ES965_RS04610 (ES965_04610) yfhJ 896016..896285 (+) 270 WP_003243789.1 YfhJ family protein -
  ES965_RS04615 (ES965_04615) yfhK 896430..896948 (+) 519 WP_129092341.1 SH3 domain-containing protein -
  ES965_RS04620 (ES965_04620) spdL 897033..897350 (+) 318 WP_021481164.1 SdpC immunity protein SpdL -
  ES965_RS04625 (ES965_04625) ephM 897352..898212 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=339594 ES965_RS04585 WP_003243354.1 893260..894054(+) (recX) [Bacillus subtilis strain SRCM103689]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=339594 ES965_RS04585 WP_003243354.1 893260..894054(+) (recX) [Bacillus subtilis strain SRCM103689]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAACATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment