Detailed information    

insolico Bioinformatically predicted

Overview


Name   nin/comJ   Type   Regulator
Locus tag   ES963_RS02005 Genome accession   NZ_CP035390
Coordinates   369056..369454 (-) Length   132 a.a.
NCBI ID   WP_015715226.1    Uniprot ID   A0AA96URL7
Organism   Bacillus subtilis strain SRCM103641     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context


Location: 364056..374454
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ES963_RS01970 (ES963_01970) - 364809..365005 (+) 197 Protein_339 hypothetical protein -
  ES963_RS01975 (ES963_01975) yckC 365024..365473 (+) 450 WP_087614278.1 RDD family protein -
  ES963_RS01980 (ES963_01980) yckD 365555..365887 (+) 333 WP_003246247.1 YckD family protein -
  ES963_RS01985 (ES963_01985) - 366015..366437 (+) 423 WP_198297576.1 MarR family transcriptional regulator -
  ES963_RS01990 (ES963_01990) - 366425..366766 (+) 342 WP_087614281.1 DUF3147 family protein -
  ES963_RS01995 (ES963_01995) - 366785..367513 (+) 729 WP_087614282.1 AAA family ATPase -
  ES963_RS02000 (ES963_02000) bglC 367586..369019 (+) 1434 WP_087614284.1 6-phospho-beta-glucosidase -
  ES963_RS02005 (ES963_02005) nin/comJ 369056..369454 (-) 399 WP_015715226.1 DNA-entry nuclease inhibitor Regulator
  ES963_RS02010 (ES963_02010) nucA/comI 369481..369930 (-) 450 WP_129092925.1 DNA-entry nuclease Machinery gene
  ES963_RS02015 (ES963_02015) tlpC 370098..371819 (-) 1722 WP_087614285.1 methyl-accepting chemotaxis protein TlpC -
  ES963_RS02020 (ES963_02020) hxlB 371930..372487 (-) 558 WP_046160042.1 6-phospho-3-hexuloisomerase -
  ES963_RS02025 (ES963_02025) hxlA 372493..373125 (-) 633 WP_003234604.1 3-hexulose-6-phosphate synthase -
  ES963_RS02030 (ES963_02030) hxlR 373357..373719 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence


Protein


Download         Length: 132 a.a.        Molecular weight: 14935.90 Da        Isoelectric Point: 4.8991

>NTDB_id=339508 ES963_RS02005 WP_015715226.1 369056..369454(-) (nin/comJ) [Bacillus subtilis strain SRCM103641]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVSSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=339508 ES963_RS02005 WP_015715226.1 369056..369454(-) (nin/comJ) [Bacillus subtilis strain SRCM103641]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAGCTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains


Predicted by InterproScan.

(9-129)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

98.485

100

0.985


Multiple sequence alignment